Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g1019 ATGGCGCCGAGCACGATCCGGAAGGCGATTGGGGCGGTGAAGGACCAGACTAGTATCGGGATTGCGAAGGTGGCTAGCAATTTGGCACCGGAACTCGAGGTGGCGATCGTCAAGGCGACGAGTCACGACGATGACCCAGCAAGCGAGAAATACGTACGGGAGATCTTGAGCTTGATGTCTTTTTCTCGTGGTTATGTTCATGCCTGTGTTTCGGCGGTGTCCAAGCGCTTGGGGAAGACCCGGGACTGGATTGTGGCGCTCAAAGCACTTATGCTTGTGCACAGGTTGATGAATGAGGGCCCCCCCTTGTTTCAAGAGGAGATCTTATATGCGACGAGGAGGGGAACTAGGCTTCTCAACATGTCCGATTTCAGGGACGAGGCTCACTCTAGCTCCTGGGATCATTCGGCTTTTGTCAGGACCTATTCTATGTATCTGGATCAACGGCTCGAGTTGATGTTGTTCGACAGGAAAAGTGGGAGTGTTGGGGGTGGTAGTGGCGGGGGCAGCGTGGACGACAGATTTGGGGGGAGAGATAATTTTAGGTCACCCCCACCGAGACCGTATGAAAATGAGTATGGACATGGAGACTTCAGGGCGGAAAGTGGGCCTGGTGGTGGGATGCGACGGACAAGATCGTTTGGTGATATGAGCGAAACGGTGGGTCGAGAAGGTAGAGAGGAGAAAAGGGTCAATACTCCGTTGAGGGATATGAAGCCCGAGCGTCTTTTTGGCAAGATGGCTCATCTGCAGAGGTTGTTGGATAGATTCTTGGCTTGTAGGCCTACGGGATTGGCAAAGAATAGTAGGATGATTTTGATTGCATTGTACCCTGTTGTCAGGGAGAGCTTTCAACTGTATGCTGATATTTGCGAGGCTTTGGCTGTTTTACTTGACAAATTCTTTGATATGGAATACCCGGACTGTGTTAAGGCATTTGACGCATATGCCAGTGCGGCAAAGCAGATCGATGAGCTTGTTGCCTTCTACAATTGGTGCAAGGATACTGGTGTGGCAAGATCATCAGAGTACCCTGAAGTTCAGAAGATTACAAGTAAGTTACTGGAGACACTGGAGGAATTTGTGAGGGACAGGGCAAAGAGGCCTAAAAGTCCAGAGAGGAAGGAGGAACCTCAGCCTGTGGTTAAAGAAGAGGAGCCTGCACCTGATATGAATGAAATAAAGGCATTACCTCCGCCCGAGAATCACACCCCATCTCCTCCACCAGAGCCAGAACCTCAGCTGCCTCAGCAGCAAGTTACAGAGGACTTGGTGAATCTGAGAGATGATGGTGTCTCCGCAGATGATCAAGGCAATAGATTGGCTTTGGCACTCTTCAATGGTGCACCGGCTAACAATGCAAATGGATCATGGGAAGCATTCCCATCAAACGGACAGCCAGAAGTAACTTCTGCCTGGCAAACCCCAGCTGCAGAATCTGGAAAGGCTGATTGGGAATTGGCATTGGTTGAGACTGCTAGCAATTTATCTAGGCAAAAAGCAGCTTTAGGTGGTGGGCTTGATCCGTTGTTGTTGAATGGCATGTACGATCAAGGAATGGTGAGACAGCATGTCAGCACTGCCCAACTGAGTGGAGGGAGCGCTAGCAGTGTTGCATTGCCAGGACCAGGAAAGAGCGCGACCCCTGTTTTAGCTCTCCCAGCCCCAGATGGATCTGTGCAGGCAGTTAATCAGGATCCATTTGCTGCGTCACTAAGCATTCCACCACCATCATATGTGCAAATGGCTGATATGGAGAAGAAGCAGCATTTGCTTGCACATGAGCAGCAGGTGTGGCAGCAATACGCGAGGGAAGGGATGCAAGGTCAAACTAGCTTGGCCAAGATCAATGGAACTGGATATTATGCTGGGGCTCCTATGCCAGCGATGCCTTATGGAATGCCCCCAGTCAATGGAATGGGACCTCCCTCCGGGTATTACTATACGCCTTACTGA 1956 0.5072 MAPSTIRKAIGAVKDQTSIGIAKVASNLAPELEVAIVKATSHDDDPASEKYVREILSLMSFSRGYVHACVSAVSKRLGKTRDWIVALKALMLVHRLMNEGPPLFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYSMYLDQRLELMLFDRKSGSVGGGSGGGSVDDRFGGRDNFRSPPPRPYENEYGHGDFRAESGPGGGMRRTRSFGDMSETVGREGREEKRVNTPLRDMKPERLFGKMAHLQRLLDRFLACRPTGLAKNSRMILIALYPVVRESFQLYADICEALAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQKITSKLLETLEEFVRDRAKRPKSPERKEEPQPVVKEEEPAPDMNEIKALPPPENHTPSPPPEPEPQLPQQQVTEDLVNLRDDGVSADDQGNRLALALFNGAPANNANGSWEAFPSNGQPEVTSAWQTPAAESGKADWELALVETASNLSRQKAALGGGLDPLLLNGMYDQGMVRQHVSTAQLSGGSASSVALPGPGKSATPVLALPAPDGSVQAVNQDPFAASLSIPPPSYVQMADMEKKQHLLAHEQQVWQQYAREGMQGQTSLAKINGTGYYAGAPMPAMPYGMPPVNGMGPPSGYYYTPY 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g1019 651 SUPERFAMILY GAT-like domain 233 364 - -
Prci15g1019 651 Pfam ANTH domain 212 364 IPR011417 GO:0005543
Prci15g1019 651 Pfam ANTH domain 31 152 IPR011417 GO:0005543
Prci15g1019 651 SMART enth_2 30 160 IPR013809 -
Prci15g1019 651 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 591 IPR045192 GO:0048268|GO:0072583
Prci15g1019 651 MobiDBLite consensus disorder prediction 363 391 - -
Prci15g1019 651 MobiDBLite consensus disorder prediction 161 229 - -
Prci15g1019 651 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Prci15g1019 651 Gene3D ANTH domain 226 375 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Prci15g1019 651 MobiDBLite consensus disorder prediction 400 415 - -
Prci15g1019 651 Gene3D - 2 156 IPR008942 -
Prci15g1019 651 CDD ANTH_N_AP180_plant 32 152 - -
Prci15g1019 651 FunFam putative clathrin assembly protein At2g25430 229 374 - -
Prci15g1019 651 FunFam Clathrin coat assembly protein 3 156 - -
Prci15g1019 651 MobiDBLite consensus disorder prediction 363 419 - -
Prci15g1019 651 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g1019 Prci-Chr15 6312166 6314930 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g1019 - - adu:107463239 1058.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g1019 15 6312166 6314930 Prci15g1019 15 6312166 6314930 ECH