Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g1015 ATGATGGATTCAAGTAACCTTTCACCTGCTGTTGGACTTGAAACAGCCCATCAAAATGGTGTTGATGAAGAACTTTCTGACTCTGGAAAGCATGATGTTGTTCCAAATGATGCTGAACCCATTGTGGCTGAAATTGCAGAGGCTGTAGCTCAAAATGGTTTGGGAAATGATGTTCTGTTGGATAGCCCTGCAACTGACATATCTTTTGCAGAAAGCAAAGAGGAATCAAATGACAGCACAGTCAGCAGCAATGCAGCCATTACTCAGCAAGAGGAAGTGAAAATTACAGATCAATCACAACAATTAAGATCATCAAAGGTTCCTGTCAAGACCAAGGCTTTGAAGCCAGCTAATCCTAAGGGTGTTCATACAAGTGGGGTGAAGAAAAGTAAGGACAGAAAGGATGAAGAGGCACAGACCTCTTTGTTAAATGGCTCTTTGACTCTGAACTCTCAGCAGCCCATTAAAAGCAGATCATTAAATGACCGCAAGACTCAAATTTCCAGGCATTCTGATAAGTCTGATGCAGCATCCTCAGGTTCACCTGTAGAGAATAAAAAACCAAAAGCATTGAAGAAAGGAACTCTTGATAAAGTTGAAGGAGAGGCAAGGTCTTTTCTAAATATCACTGCAGAAGATGCCAAACCTCCCAAGGTGGGGACGCTTCCAAATTATGGATTTAGTTTCCGGTGTGGTGAACGAGCTGAGAGAAGAAAAGAGTTCTACTCTAAGCTTGAGGAAAAGATTCATGCAAAGGAAGTGGAGAAGAGTAACTTGCAAGCAAAAACCAAGGAGAGCCAGGAAGCTGAAATTAAGATGCTTAGGAAGAGTCTAGGATTTAAAGCGACTCCAATGCCGAGCTTTTACCAGGAGCCTCCTCCTCCAAAGGCAGAGCTAAAGAAGATACCAACTACAAGAGCAAAATCTCCTAAGCTTGGACGAAGGAAGGATTCGACGGGACCAGAGTTAGATGGAAGTCCTAGCAGCAGTGCTCAATTGGGTCGTCTAAGTCTGGATGAGAAAGTGTCTAAGAGTAACCCCACCAAGAAAATTACTCATGCCCATCCAAAGAAGCCACAACGGAGATCTCTTCCTTCTAAACTGCCTTCTGAAAAGACCAGTTCATCCAATTCATCTAAGGCACTGAATGATGAGAAGACCACGTCATCCAGTGTAACAAATAAAGGTACCACCTTGTCCAGTATTGTTGAGAGAGAGAAATGTCAATTGGATCGTGCAGCCAATGAAGAGAATGGTGCCTTGTCCTGTAATACAAGTGAACCTCCTTCGCTGAATATAGATCAAACAGCTCTCTCAGACAAGCCAATCGAAACAGAGCCTCAAGTGAATGGTGACATTGTGGTTGAAGAGCAACCTCAGCCCCCATTGGTGCAGGAACCAGTCGGGGCAGACCATTAA 1419 0.4362 MMDSSNLSPAVGLETAHQNGVDEELSDSGKHDVVPNDAEPIVAEIAEAVAQNGLGNDVLLDSPATDISFAESKEESNDSTVSSNAAITQQEEVKITDQSQQLRSSKVPVKTKALKPANPKGVHTSGVKKSKDRKDEEAQTSLLNGSLTLNSQQPIKSRSLNDRKTQISRHSDKSDAASSGSPVENKKPKALKKGTLDKVEGEARSFLNITAEDAKPPKVGTLPNYGFSFRCGERAERRKEFYSKLEEKIHAKEVEKSNLQAKTKESQEAEIKMLRKSLGFKATPMPSFYQEPPPPKAELKKIPTTRAKSPKLGRRKDSTGPELDGSPSSSAQLGRLSLDEKVSKSNPTKKITHAHPKKPQRRSLPSKLPSEKTSSSNSSKALNDEKTTSSSVTNKGTTLSSIVEREKCQLDRAANEENGALSCNTSEPPSLNIDQTALSDKPIETEPQVNGDIVVEEQPQPPLVQEPVGADH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g1015 472 MobiDBLite consensus disorder prediction 1 37 - -
Prci15g1015 472 PANTHER PROTEIN WVD2-LIKE 4 97 420 IPR044833 GO:0008017
Prci15g1015 472 MobiDBLite consensus disorder prediction 366 404 - -
Prci15g1015 472 MobiDBLite consensus disorder prediction 301 321 - -
Prci15g1015 472 Coils Coil 242 262 - -
Prci15g1015 472 MobiDBLite consensus disorder prediction 125 139 - -
Prci15g1015 472 MobiDBLite consensus disorder prediction 348 362 - -
Prci15g1015 472 MobiDBLite consensus disorder prediction 66 198 - -
Prci15g1015 472 MobiDBLite consensus disorder prediction 74 107 - -
Prci15g1015 472 MobiDBLite consensus disorder prediction 140 161 - -
Prci15g1015 472 MobiDBLite consensus disorder prediction 322 341 - -
Prci15g1015 472 MobiDBLite consensus disorder prediction 20 34 - -
Prci15g1015 472 MobiDBLite consensus disorder prediction 418 439 - -
Prci15g1015 472 MobiDBLite consensus disorder prediction 275 439 - -
Prci15g1015 472 Pfam Targeting protein for Xklp2 (TPX2) domain 227 302 IPR027329 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g1015 Prci-Chr15 6286993 6292389 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g1015 - - gsj:114408962 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1018 2 7499241 7504142 Prci15g1015 15 6286993 6292389 CCT
Prci15g1015 15 6286993 6292389 Prci15g1015 15 6286993 6292389 ECH