Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0992 ATGGGGAGGGGTGGAATTCCGTCAATTGATGACGGAAGAGATAGGCTTTTCTCAATCTCAGATTTGGGGTCTCCATGGAGTATTCAAGAGGGATATTATCCTCCCGGAGGCTTATTTGCCAGCGTGAATCAGATGGGAATGGGTTTTGGCGCTCAACCCAATGCTTCTGATTCCCGCGACAATGGCAACGAAAAACTACCCTATGCTGAAATGTTCGTGAAGTATGTGCAATCACTGGGCAAAGTTGAGAATGATGGAGCAAAGGAGGAAGAAGGGAATAAAGGCAGGAAGAAGGGTGGTCTCAAACTGAAAATTAAGGTCAGGAATCCATCACTAAGGAGGTTAATTAGTGGCGCCGTTGCCGGGGCGGTGTCCCGAACCGCAGTGGCACCTTTGGAGACTATAAGGACTCATTTAATGGTTGGGAGTAGCGGCCATTCTTCTACTGAGGTGTTCAGCAATATTATGAAGACTGATGGTTGGAAGGGGTTGTTTAGGGGCAATCTCGTAAATGTGATTCGGGTTGCACCAAGCAAGGCCATAGAGCTATTTGTTTATGATACAGTCAACAAAAATCTATCACCAAAGCCCGGGGAACAGCCAAAACTCCCTGTCTCTGCATCATTGGTTGCTGGAGCCTGTGCAGGAGTTAGTTCTACTATATGCACTTACCCTCTTGAGTTAGTCAAGACTCGACTAACTATTCAGAGAGGTGTTTATAATGGTTTGCTGGATGCATTCTTAAAGATAATTCGTGATGAAGGCCCTGCAGAACTTTATCGAGGCCTTGCTCCCAGCCTTATTGGAGTGATTCCATATTCTGCCACCAATTACTTCGCCTATGACACACTGCGGAAAGCATACCGAAAAATTTTCAAGCAAGAGAAGATTGGCAACATTGAAACCCTCTTGATCGGATCGGCAGCTGGTGCAATTTCAAGTAGTGCTACTTTTCCGCTTGAGGTAGCTCGCAAGCATATGCAAGTTGGAGCTCTGAGTGGAAGGCAGGTTTACAGAAATGTGATTCATGCTCTTGCAAGCATACTTGAACAAGAAGGGATTCCAGGTTTATATAGAGGGTTGGGACCAAGCTGTATGAAGTTGGTACCAGCCGCCGGCATCTCCTTCATGTGCTATGAAGCGTGCAAGAGAGTTCTGGTTGAGATTGATGGCGAGGAATAA 1182 0.4619 MGRGGIPSIDDGRDRLFSISDLGSPWSIQEGYYPPGGLFASVNQMGMGFGAQPNASDSRDNGNEKLPYAEMFVKYVQSLGKVENDGAKEEEGNKGRKKGGLKLKIKVRNPSLRRLISGAVAGAVSRTAVAPLETIRTHLMVGSSGHSSTEVFSNIMKTDGWKGLFRGNLVNVIRVAPSKAIELFVYDTVNKNLSPKPGEQPKLPVSASLVAGACAGVSSTICTYPLELVKTRLTIQRGVYNGLLDAFLKIIRDEGPAELYRGLAPSLIGVIPYSATNYFAYDTLRKAYRKIFKQEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYRNVIHALASILEQEGIPGLYRGLGPSCMKLVPAAGISFMCYEACKRVLVEIDGEE 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0992 393 PANTHER SOLUTE CARRIER FAMILY 25 103 386 - -
Prci15g0992 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 287 IPR018108 -
Prci15g0992 393 Pfam Mitochondrial carrier protein 297 387 IPR018108 -
Prci15g0992 393 Pfam Mitochondrial carrier protein 111 193 IPR018108 -
Prci15g0992 393 Pfam Mitochondrial carrier protein 203 290 IPR018108 -
Prci15g0992 393 SUPERFAMILY Mitochondrial carrier 110 381 IPR023395 -
Prci15g0992 393 Gene3D Mitochondrial carrier domain 106 389 IPR023395 -
Prci15g0992 393 FunFam Adenine nucleotide transporter BT1, chloroplastic/mitochondrial 107 390 - -
Prci15g0992 393 PRINTS Mitochondrial carrier protein signature 260 278 IPR002067 GO:0055085
Prci15g0992 393 PRINTS Mitochondrial carrier protein signature 167 187 IPR002067 GO:0055085
Prci15g0992 393 PRINTS Mitochondrial carrier protein signature 127 141 IPR002067 GO:0055085
Prci15g0992 393 PRINTS Mitochondrial carrier protein signature 218 236 IPR002067 GO:0055085
Prci15g0992 393 PRINTS Mitochondrial carrier protein signature 306 328 IPR002067 GO:0055085
Prci15g0992 393 PRINTS Mitochondrial carrier protein signature 114 127 IPR002067 GO:0055085
Prci15g0992 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 192 IPR018108 -
Prci15g0992 393 ProSiteProfiles Solute carrier (Solcar) repeat profile. 297 385 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0992 Prci-Chr15 6208661 6212683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0992 209 393 Organic Solute Cotransporters AT4G32400 31.720 3.14e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0992 K14684 - qsu:111999876 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0999 2 7409308 7412600 Prci15g0992 15 6208661 6212683 CCT
Prci15g0992 15 6208661 6212683 Prci15g0992 15 6208661 6212683 ECH