Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0990 ATGGAAGCCACTGCCGGAATGGTGGCTGGATCGTATAAAAGGAACGAGCTTGTCCGAATTCGTCACGATTCAGATGGCGGGCCCAAACCCTTAAAGAATTTGAATGGCCAAATCTGTCAAATATGTGGCGATACTGTGGGATTAACAGCAACTGGTGATGTTTTTGTTGCTTGCAATGAGTGTGCCTTCCCAGTCTGTCGTCCTTGCTATGAATATGAGCGAAAAGATGGGAACAAGTCTTGCCCTCAGTGCAAGACTAGGTACAAGAGGCACAAAGGGAGTCCAAGAGTGGAGGGAGATGACGATGAGGATGATGTTGATGATATTGAGAATGAGTTCAATTATGATCAAGGAAATACGAAACCTAGGCGGCAGTGGGAAGGAGAAGATGCTGAACTCTCTTCATCTGCTAGATATGATTCTCAACAACCAATTCCTCTCCTCACCAATGGACAGCCGATGTCTGGTGAGATTCCGACGCCTGATACCCAATCTGTGCGGACTACATCAGGTCCTCTGGGTCCATCTGAAAAGGTTCACTCACTTCCCTACATTGATCCAAGGCAACCAGTCCCCGTGAGAATTGTAGACCCTTCAAAGGACTTGAATTCTTATGGTCTGCCTAATGTTGACTGGAAAGAAAGGGTTGAAGGTTGGAAGCTCAAGCAGGAGAAAAACATGGTGCAAATGACTGGTAGATATACTGAAGGGAAGGGTGACATCGAAGGGACAGGTTCCAATGGAGAAGAACTGCAAATGGTTGATGATGCTCGACAACCTTTGAGTCGTGTGGTGCCCATTTCTTCTTCTCACTTGACCCCTTATCGTGTTGTTATTATACTCCGTCTTATTATTCTGGGCTTCTTCTTACAATATCGTGTGACTCATCCTGTTAAAGATGCATACCCTCTTTGGCTGACATCAGTTATCTGTGAGATTTGGTTTGCCATGTCTTGGATACTGGATCAGTTTCCAAAATGGTCTCCCATTAATCGGGAGACTTATCTTGACAGGCTTACTTTAAGATATGATCGTGATGGAGAACCATCTCAATTGGCTCCTGTGGATGTTTTTGTTAGTACTGTGGATCCCCTCAAAGAGCCTCCTCTTGTCACTGCAAACACTGTTTTGTCAATACTTGCTGTCGATTACCCTGTGGATAAGGTTTCTTGCTATGTGTCAGACGATGGTTCAGCTATGTTGACTTTTGAAGCCCTTTCAGAAACTGCTGAGTTTGCAAAGAAGTGGGTGCCCTTCTGCAAAAAGTACAATATTGAGCCAAGAGCCCCCGAGTTTTATTTTGCTCAGAAGATAGATTACTTGAAGGACAAGATTCAACCTTCATTTGTGAAGGAGCGCCGAGCAATGAAGAGAGAGTATGAAGAATTCAAAGTAAGGATCAATGCCCTGGTAGCCAAAGCTCAAAAGATGCCAGAAGAAGGCTGGACAATGCAGGATGGAACTCCCTGGCCTGGAAATAATCCAAGGGATCATCCTGGAATGATTCAGGTGTTCTTAGGTCATAGCGGAGGGCTCGATACAGATGGAAATGAGCTACCTAGACTTGTTTATGTTTCCCGTGAGAAACGACCAGGTTTTCAGCATCACAAGAAGGCTGGAGCTATGAATGCTTTGATTCGAGTTTCAGCTGTCCTGACCAATGGTGCGTATCTATTGAATGTCGATTGTGACCACTATTTCAATAATAGCAAAGCTCTTAAGGAAGCTATGTGTTTTATGATGGATCCTGTTCTGGGGAAGAAGACTTGCTATGTACAATTCCCTCAGCGGTTTGATGGCATTGATTTGCATGATCGATATGCCAATCGCAATATTGTGTTCTTTGATATCAACATGAAGGGGCAAGATGGTGTCCAGGGCCCAGTCTATGTTGGAACTGGTTGTTGTTTCAATAGACAGGCTCTGTATGGCTATGATCCTGTCTTGACTGAGGAAGATTTGGAGCCCAATATTATTGTGAAGAGTTGTTGGGGTTCTAGGAAGAAGGGAAAAGATAAGAAGTATATTGACAAGAAGAGGGCAGCAAAAAGGACTGAATCCACCATTCCCATCTTCAATATGGAAGACATAGATGAGGGTGTTGAAGGGTATGATGATGAGAGGTCACTTCTTATGTCTCAGAAGAGCCTAGAGAAGCGTTTTGGTCAGTCCCCAGTTTTCATTGCCGCCACCTTCATGGAGCAGGGTGGCATTCCTCCCTCAACTAACCCTGCGACTCTGCTCAAGGAAGCAATCCATGTTATCAGCTGCGGTTATGAAGACAAGACAGAATGGGGTAAAGAGATTGGATGGATCTATGGTTCTGTGACTGAAGATATCTTGACTGGGTTTAAGATGCATGCGCGTGGTTGGATCTCTGTTTATTGCATGCCACTTCGCCCTGCATTCAAGGGTTCTGCTCCCATCAATCTTTCTGATCGTCTGAATCAGGTGCTTCGGTGGGCCTTGGGGTCCATCGAGATTTTTCTTAGCAGGCATTGTCCCCTATGGTATGGCTACAATGGAAAATTGAAGCCCCTACAGAGGCTGGCTTATATTAACACAATCGTCTACCCTTTTACCTCAATCCCGCTGATTGCTTATTGTGTGCTTCCTGCATTTTGTCTTCTCACTAATAAATTTATTATTCCAGAGATAAGCAACTTTGCTAGCATGTGGTTTATTCTTCTCTTCGTCTCCATTTTTGCAACCTCAATTCTTGAGCTCAGGTGGAGTGGGGTTGGCATAGAAGACTGGTGGAGAAATGAGCAGTTCTGGGTTATTGGTGGTACATCCGCACATCTCTTCGCCGTATTCCAAGGGCTTCTAAAAGTGCTTGCCGGGATTGATACAAACTTCACTGTGACGTCGAAGGCATCTGACGATGATGGGGATTTCGCAGAGCTTTATGTGTTCAAATGGACATCACTTCTGATCCCTCCTACAACAGTCCTTATAGTGAACATTATAGGGATCGTTGCTGGTGTATCCTACGCCATTAACAGTGGATACCAATCGTGGGGTCCTCTATTTGGAAAGCTGTTCTTTGCTATATGGGTGGTTGCCCATCTATATCCATTCTTGAAGGGTCTGCTTGGAAGGCAAAATCGTACCCCAACCATTGTTATTGTGTGGTCTATACTTCTTGCTTCCATATTCTCCTTGCTGTGGGTGAGGATTGACCCCTTCACCAACGACACCTCGAAAGCTTCTGGCAATGGTCAATGTGGCATCAACTGCTAG 3243 0.4487 MEATAGMVAGSYKRNELVRIRHDSDGGPKPLKNLNGQICQICGDTVGLTATGDVFVACNECAFPVCRPCYEYERKDGNKSCPQCKTRYKRHKGSPRVEGDDDEDDVDDIENEFNYDQGNTKPRRQWEGEDAELSSSARYDSQQPIPLLTNGQPMSGEIPTPDTQSVRTTSGPLGPSEKVHSLPYIDPRQPVPVRIVDPSKDLNSYGLPNVDWKERVEGWKLKQEKNMVQMTGRYTEGKGDIEGTGSNGEELQMVDDARQPLSRVVPISSSHLTPYRVVIILRLIILGFFLQYRVTHPVKDAYPLWLTSVICEIWFAMSWILDQFPKWSPINRETYLDRLTLRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAKKWVPFCKKYNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPVLGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGQDGVQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCWGSRKKGKDKKYIDKKRAAKRTESTIPIFNMEDIDEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISVYCMPLRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGKLKPLQRLAYINTIVYPFTSIPLIAYCVLPAFCLLTNKFIIPEISNFASMWFILLFVSIFATSILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNIIGIVAGVSYAINSGYQSWGPLFGKLFFAIWVVAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTNDTSKASGNGQCGINC 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0990 1080 FunFam Cellulose synthase 472 646 - -
Prci15g0990 1080 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Prci15g0990 1080 SUPERFAMILY RING/U-box 22 111 - -
Prci15g0990 1080 SUPERFAMILY Nucleotide-diphospho-sugar transferases 373 655 IPR029044 -
Prci15g0990 1080 Pfam Cellulose synthase 355 1070 IPR005150 GO:0016020|GO:0016760|GO:0030244
Prci15g0990 1080 Coils Coil 453 473 - -
Prci15g0990 1080 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 513 655 IPR029044 -
Prci15g0990 1080 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 259 1046 - -
Prci15g0990 1080 MobiDBLite consensus disorder prediction 135 175 - -
Prci15g0990 1080 CDD mRING-HC-C4C4_CesA 37 87 - -
Prci15g0990 1080 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Prci15g0990 1080 MobiDBLite consensus disorder prediction 74 185 - -
Prci15g0990 1080 Pfam Zinc-binding RING-finger 29 106 IPR027934 -
Prci15g0990 1080 FunFam Cellulose synthase 21 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0990 Prci-Chr15 6200449 6207522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0990 1 1078 Glycosyltransferase AT4G32410 86.796 0.0 1912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0990 K10999 - gmx:100798193 2079.29