Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0965 ATGGCTTCTTGCAAATCACAAGTGGAAGCAACCGAGTGTGTGTGGGTTCAGGGGCCTATCATTGTAGGTGCTGGACCCTCTGGTTTAGCCGTCGCTGCTTGCCTCTCTGAACAGTACCGGGCACCTTCCCTTGTTCTTGAGAGGTGCGACTGCATTGCTTCTCTCTGGAAGACCAAAACCTACGATCGTCTCAAGCTTCATCTTCCAAAACAATTCTGCGAGCTTCCTTTAATGGGTTTTCCCGCCAATTATCCCAAGTATCCTAACAAGTATCAGTTCATCTCCTACTTGGATTCCTACGCTTCACGCTTCTCAATTCGCCCCAAGTTCAACCAATCCGTCCACGAAGCTCGGTTCGACCCTGCCTCGGGGCTCTGGATCGTCCGGACTCAGGATCTCGTCTACGTTTCTCGGTGGCTCGTTGTGGCCACCGGCGAGAATGCTGAGCCCTTTATTCCTAAAATCGTCGGGATTGAGAATTTTCATGGACCAATTGTTCACACCACCGGTTACAGGTCTGGCACTGATTATAAGAACAAGAAGGTTCTGGTCATAGGTTGTGGCAATTCTGGTATGGAAGTTAGCTTGGATCTCTGCAACCACAATGCAAGACCTTACTTGGTTGTTAGAAACACTGTCCATGTTCTCCCTCGAGAAATGTTTGGATTCTCAACGTTCGGACTAGCCATGACCCTAATTAAATGGCTTCCGTTAACAATAGTAGACAAGATCCTCATACTTTTGGCTTATTTCATCATCGGAAACACCGATCACTACGGTATCCGGCGACCGAAGACCGGCCCAATGGAGCTTAAATGCGCCGCCGGAAAATCCCCAGTTCTTGACGTCGGCGCCCTGGAAGAGATCAAAGCGGGAAAAATCAAGGTGGTGGATGGTGTGAAGGAGATAACCAGAAATGGTGCCAAAATGGTGAATGGACAGGAGAAGGAGTTCGATGCTATAATATTGGCAACGGGATACAGAAGTAACGTGCCTAGTTGGCTCAAGAGCCGTGAATTCTTCACCTCGGACGGGATGCCAAAAACGCCGTTTCCAAGCGGATGGAAGGGAGGGAACGGATTGTATGCGGCAGGGTTCTCGAGAAGAGGGATACTCGGAGCCGCCTCGGATGCTGTGAATATCGCGAGAGACATCGCCGATCAGTGGAGGAATGTTAAGGACCATAAGAGTTACCGTGAACCACAGATTATCCTAGCCGATAGTCCCTAA 1230 0.4959 MASCKSQVEATECVWVQGPIIVGAGPSGLAVAACLSEQYRAPSLVLERCDCIASLWKTKTYDRLKLHLPKQFCELPLMGFPANYPKYPNKYQFISYLDSYASRFSIRPKFNQSVHEARFDPASGLWIVRTQDLVYVSRWLVVATGENAEPFIPKIVGIENFHGPIVHTTGYRSGTDYKNKKVLVIGCGNSGMEVSLDLCNHNARPYLVVRNTVHVLPREMFGFSTFGLAMTLIKWLPLTIVDKILILLAYFIIGNTDHYGIRRPKTGPMELKCAAGKSPVLDVGALEEIKAGKIKVVDGVKEITRNGAKMVNGQEKEFDAIILATGYRSNVPSWLKSREFFTSDGMPKTPFPSGWKGGNGLYAAGFSRRGILGAASDAVNIARDIADQWRNVKDHKSYREPQIILADSP 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0965 409 Pfam Pyridine nucleotide-disulphide oxidoreductase 20 212 - -
Prci15g0965 409 SUPERFAMILY FAD/NAD(P)-binding domain 179 394 IPR036188 -
Prci15g0965 409 Gene3D - 18 397 IPR036188 -
Prci15g0965 409 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 16 390 - -
Prci15g0965 409 SUPERFAMILY FAD/NAD(P)-binding domain 20 213 IPR036188 -
Prci15g0965 409 PRINTS FAD-dependent pyridine nucleotide reductase signature 181 199 - -
Prci15g0965 409 PRINTS FAD-dependent pyridine nucleotide reductase signature 19 38 - -
Prci15g0965 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 177 201 - -
Prci15g0965 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 18 40 - -
Prci15g0965 409 PRINTS Pyridine nucleotide disulphide reductase class-II signature 138 146 - -
Prci15g0965 409 FunFam Flavin-containing monooxygenase 19 394 - -
Prci15g0965 409 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0965 Prci-Chr15 6100616 6103383 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0965 K11816 - qsa:O6P43_015643 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0973 2 7205587 7208113 Prci15g0965 15 6100616 6103383 CCT
Prci15g0965 15 6100616 6103383 Prci15g0965 15 6100616 6103383 ECH