Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0961 ATGGCTGGAGATCTATCCATTGAAGCAGCAAAAAACATTCCCATGGACTTTTCTTCAGCAGAGAGCTTACCTGATTCTCACACATGGTGGTCAAAAGGATGCTCTGACATCATTGATGATGGCTCCGTATCCATACCTGTTGTGGACCTCACGGATCCGAATGCCATGGAAACCATAAAGCTTGCATGCGAGGAGTGGGGTATTTTTCAACTGAAAAATCATGGAATACCCTTATCTCTGTTGAACCACGTGAATGAAGAGATCAAACGCCTCTTCTCTCTCCCAGCTGAGCAAAAGGTGAAAGCCTTGAGGCCTCCTGGGGCACAGGCTGGGTATGGTTCTGCTTACATTTCACCATTCTTTCCGAAGGTCATGTGGCACGAAGGATTCACCATTGTCGGCTCTTCCTACGATGATGCTAAGAAAGTTTTTACTAATCATGATGATTTTGCACGTTTCAGTGAAAAAATGGAAGAAATTCAAAAGCAGTTGAAAAATGTAGTAGAGAAGGTAACAGGCATGATACTGAATTTATTGGGGGTGTGTGATAAAGAGAAGAAATGGGTGAAGAGCGATAACCAAACGCTTCAAATGAACTCGTATCCAAGTTGTCCAGACCCAGATCGAGCTATAGGTCTCGCGCAACACAAAGACACATCCATCATCACAATTCTCCACCAAACCCAAGTCCATCCCCAAACCCGAAGCCAAGTCCTGACCCAGGACCAAACCGGTGGGCTCCAGATCTTCAAAGAAGGAATCGGGTGGGTTCCGGTGCGCCCGGATCCAGATGCGTTTGTAGTGCATGTCGGTGACATCCTTGAGATACTGTCGAATGGGAAGTTCACATCGGTGTTGCATCGCGTCACAGTGAGTAGGAGTGCTCATCGATATTCCTTTGCATTTTTCCACAGGCCCTCACCTGAAAGTCCTCTCTCTCCTTTGCACTCTCATCCTCGTTTTCGTGTTGTCACCTTGAAGGAATATGATGCTATCAAGGCCAAGGATCGACCTAATGCTTTGGCTTCCATCTCCGTTTAA 1041 0.464 MAGDLSIEAAKNIPMDFSSAESLPDSHTWWSKGCSDIIDDGSVSIPVVDLTDPNAMETIKLACEEWGIFQLKNHGIPLSLLNHVNEEIKRLFSLPAEQKVKALRPPGAQAGYGSAYISPFFPKVMWHEGFTIVGSSYDDAKKVFTNHDDFARFSEKMEEIQKQLKNVVEKVTGMILNLLGVCDKEKKWVKSDNQTLQMNSYPSCPDPDRAIGLAQHKDTSIITILHQTQVHPQTRSQVLTQDQTGGLQIFKEGIGWVPVRPDPDAFVVHVGDILEILSNGKFTSVLHRVTVSRSAHRYSFAFFHRPSPESPLSPLHSHPRFRVVTLKEYDAIKAKDRPNALASISV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0961 346 Gene3D - 4 330 IPR027443 -
Prci15g0961 346 SUPERFAMILY Clavaminate synthase-like 15 336 - -
Prci15g0961 346 Pfam 2OG-Fe(II) oxygenase superfamily 197 306 IPR044861 -
Prci15g0961 346 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 45 329 - -
Prci15g0961 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 192 306 IPR005123 -
Prci15g0961 346 Pfam non-haem dioxygenase in morphine synthesis N-terminal 45 135 IPR026992 -
Prci15g0961 346 Coils Coil 150 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0961 Prci-Chr15 6074000 6075110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0961 43 329 Glycosyltransferase AT5G59530 28.296 1.14e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0961 K04124 - gmx:100818754 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0961 15 6074000 6075110 Prci2g0969 2 7139735 7141917 CCT