Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0946 ATGAAGCCAGGAGTATCTTCTTTGAATCCATACGCGGCCGCCTATATTCCACTCTCTAAAAGGCAGGCAGATGGTGGAACTTGCGTAGCAGACAATGATTACATGAGTTATGATGGAGCTGTCGGGTTTCAGACTCCTCAGCACACGACACAAGATCAGCACCATGTTCACCATAACACTCGTGCTCCTCAAAAGCTCTCTACTTCTCAGGCGTTTCATGTGAAGAGCCAACCTGAATCTAGTTCTTGCAGTTCAGCAGCGCAGGGTGCAGTTCAGGTGGCAGATAAACAGATGCTGGATGAAGAATCTGATATGGATCTGGAATATCTCAGGATGACGTTTCCTGGAATATCTGATCAATCCCTTGCTGATGTCTACATGGTCAACGGGGGTGATCTGGAAGCCGCTATTGACATGCTGAGCCAGCTTGAGTTTGACGGTGTCCAGTCTTCTGAAACTCTTCCAGAGACACTGGATATTGGGGATATTTCAGAATCTGGAAATTTTGCTGATTCTGCTTCATTAAAGCTGAAGAATGTGGCAGCCGACGCCAGTACTTCCCCTAGTCCCTCAGCATCGGCCACTGTCTCGTAA 594 0.4764 MKPGVSSLNPYAAAYIPLSKRQADGGTCVADNDYMSYDGAVGFQTPQHTTQDQHHVHHNTRAPQKLSTSQAFHVKSQPESSSCSSAAQGAVQVADKQMLDEESDMDLEYLRMTFPGISDQSLADVYMVNGGDLEAAIDMLSQLEFDGVQSSETLPETLDIGDISESGNFADSASLKLKNVAADASTSPSPSASATVS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0946 197 ProSiteProfiles CUE domain profile. 102 145 IPR003892 GO:0043130
Prci15g0946 197 Gene3D - 84 151 - -
Prci15g0946 197 CDD CUE_CID7_like 104 146 IPR041806 -
Prci15g0946 197 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 6 1 188 IPR038981 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0946 Prci-Chr15 6005494 6007964 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0946 - - qsa:O6P43_015629 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0946 15 6005494 6007964 Prci15g0946 15 6005494 6007964 ECH