Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0921 ATGCCACTCGGAGAAAGGGCTGGGGACAAGACCGAATCCCGGTATTGCGGTGTAGAGACGGAATTCAGCGATGACATGCCACGCTTGCTGACTCTCCATCTCGTTTCCGGGGGATTCGATTTCGTTGTTGCTCCTTTGATGGATCCTGCATATCGGCCAAGCTTAGTGCAGAAGGATAGTTTGGGTTCTGCTGTTCCTCCATTTGCTGGATCAGACTTAGTCTTGAGCCCTTCACAGTGGAGTACCCGTGTAGTGGGAAAAATTAGCACATGGATAGATTTGGATTCAGAGGATGAAACCCTAAGGATGGACTCTGAAACCACCCTCAGACAAGAAATAGCTTGGGCATCTCATCTCTCTTTACAGGCTTGCCTTCTTCCAGCTCCCAAGAGAACATCTTGTGCTAATTATGCTAGATGTGTGAATCAAATCTTGCAGAACCTAAATCATATGCAGCTGTTTCTTAGGATTCCATTGTTTATGTCTGATGATGATTCCATGGGCGCCAATTCTGATACTTTGATTGATTCTTGGGAAACTTGGAATTCATTTCGTCTTCTCTGTGAGCATCATAGTCAATTGTCCATTGCACTTGATATTGTGAGTACCTTACCATCGGCAAACTCACTTGGACGCTGGTTTGGGGAGCCTGTTAGAGCAGCTATATTAAATACTGATTGCTTTTTGACTAATGCTCGGGGTTATCCATGCCTCTCAAAGCGCCACCAGATGCTAATTACTCGCTTTCTTAACCATTCTATTCAGATAATTATATCTGGAAAATCAGTTCATCCAAGAGCAAGTGTGGATCCAGATGCTTCTCATGCTGCTGTGGAAAGACATCCTTTGAGGCCGTATCTGGACTATGTTGCTTATCTATACCAAAGAATGGATCCCATTCCTGAGCAAGAACGTTTTGAGCTTGGTTACAGGGACTTTTTACAGGCACCCTTGCAACCTCTCATGGATAATCTAGAGGCTCAAACCTATGAAACATTTGAGAAAGACACAGTGAAATACAGTCAGTATCAAAGAGCTATATGTAAAGCATTGCTGGACAGGGTTCCTGATGAAAAGGTGTCTGAAATTACCACTGTATTGATGGTTGTTGGTGCTGGGCGTGGGCCTCTTGTTCGGGCATCAATAGAGGCAGCTGAAGAGACTGGGAGGAAGCTAAAAGTATATGCGGTGGAAAAGAATCCAAATGCAGTTGTTACACTTAATGTAGTTTTTTCTCCCCTTTCGTTTATGAGTTTGATTAGGTTAGAGGGCTGGGAAGATACAGTTACCATAGTCTCAAGCGACATGCGCTTCTGGAATGCCCCTGAACAGGCTGACATATTGGTAAGCGAATTGCTAGGTTCTTTTGGTGACAATGAGCTGTCTCCTGAGTGCCTTGATGGAGCCCAGAGGTTTCTGAAGCAAGATGGAATTTCAATACCATCTTCGTACACAAGTTTCCTCCAACCAGTGACAGCTTCAAAGTTATACAATGATGTTAAGGCACATAAAGATATAGCACACTTTGAAACAGCATATGTTGTGAAATTACATAATGTAGCCAGGCTTGCGCCATCTCAACCTGTTTTTACTTTTACTCATCCAAAACCCTCTGATATGGAAAGCAACCATCGATATAAGAAGTTGCAGTTTGTGATACCTAATGACACTGGATCAGCAACGGTTCATGGGTTTGCTGGCTACTTTGATGCTACACTTTACAATGATGTGCATCTTGGAATTGAACCCTCAACAGCAACGCCAAATATGTTCAGCTGGTTTGCAATATTTTTCCCATTAAGGGATCCCGTACATGTGCAACCAGGAGCTACTTTAGAAGTACATTTCTGGCGCTGTTGTGGTTCAACAAAGGTTTGGTATGAGTGGTGCGTTACATCTCCCTCTCCGTCTCCAATTCACAATAGCAGTGGACGCTCCTACTGGGTTGGCCTTTAG 1956 0.4381 MPLGERAGDKTESRYCGVETEFSDDMPRLLTLHLVSGGFDFVVAPLMDPAYRPSLVQKDSLGSAVPPFAGSDLVLSPSQWSTRVVGKISTWIDLDSEDETLRMDSETTLRQEIAWASHLSLQACLLPAPKRTSCANYARCVNQILQNLNHMQLFLRIPLFMSDDDSMGANSDTLIDSWETWNSFRLLCEHHSQLSIALDIVSTLPSANSLGRWFGEPVRAAILNTDCFLTNARGYPCLSKRHQMLITRFLNHSIQIIISGKSVHPRASVDPDASHAAVERHPLRPYLDYVAYLYQRMDPIPEQERFELGYRDFLQAPLQPLMDNLEAQTYETFEKDTVKYSQYQRAICKALLDRVPDEKVSEITTVLMVVGAGRGPLVRASIEAAEETGRKLKVYAVEKNPNAVVTLNVVFSPLSFMSLIRLEGWEDTVTIVSSDMRFWNAPEQADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFLQPVTASKLYNDVKAHKDIAHFETAYVVKLHNVARLAPSQPVFTFTHPKPSDMESNHRYKKLQFVIPNDTGSATVHGFAGYFDATLYNDVHLGIEPSTATPNMFSWFAIFFPLRDPVHVQPGATLEVHFWRCCGSTKVWYEWCVTSPSPSPIHNSSGRSYWVGL 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0921 651 Gene3D - 483 651 - -
Prci15g0921 651 Pfam PRMT5 oligomerisation domain 483 649 IPR035248 -
Prci15g0921 651 FunFam Protein arginine N-methyltransferase 5 306 482 - -
Prci15g0921 651 FunFam Protein arginine N-methyltransferase 5 483 651 - -
Prci15g0921 651 Gene3D Vaccinia Virus protein VP39 306 482 IPR029063 -
Prci15g0921 651 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 314 629 IPR025799 GO:0016274|GO:0018216
Prci15g0921 651 FunFam Protein arginine N-methyltransferase 14 303 - -
Prci15g0921 651 Pfam PRMT5 arginine-N-methyltransferase 302 480 IPR035075 -
Prci15g0921 651 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 329 650 IPR029063 -
Prci15g0921 651 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 7 651 IPR025799 GO:0016274|GO:0018216
Prci15g0921 651 Pfam PRMT5 TIM barrel domain 38 296 IPR035247 -
Prci15g0921 651 Gene3D - 4 304 - -
Prci15g0921 651 PIRSF PRMT5 3 651 IPR007857 GO:0006479|GO:0008168|GO:0035246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0921 Prci-Chr15 5892575 5903608 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0921 K02516 - gmx:100782245 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0921 15 5892575 5903608 Prci15g0921 15 5892575 5903608 ECH