Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0868 ATGGGGATAGCAGAAGCATGCTCCAGGATTATTGGAGACTTTTTACAAGCTTTTAGATGTTCACAACAAAGCTCAGAGCCTCAAGCTGATCACAACCAACCTCCCTGCAAGCCCCAGAATGTGCTCAAACTGGATGACCAGATGGTCAGTGCTCTCATCACTGTCTTCGGCATGGAAAACAATGGAAGAATCAAGAAGGAAACTGCTCGGCAAGTGGTAGAGAAGCTCGGTTTGCTATATGGTTCAGAGGAGGAGAAGCCCTCAGGGTTCGAGCTGCCTGACCATGGAGGCTTAGAAGATGATGAAGTGCCTGTGGAAGAAGTTCTCAATGGATTGGAAGACATGTCAAAGCGCAGCGAGCTATTACACAAGGCCTTCAAAATCTTCGATGAAGATGGAGATGGGTACATAGATGCAATGGAGTTGAAGAGGGTTCTGGATTGCTTGGGTTTGGATAAAGGTTGGGACATGAGCACCATTGAGAAAATGGTGGATGTTGCAGATTTGAACTTTGATGGCAAGGTTGATTTCAGTGAGTTTGAGTTGATGATGGGGTAG 558 0.4624 MGIAEACSRIIGDFLQAFRCSQQSSEPQADHNQPPCKPQNVLKLDDQMVSALITVFGMENNGRIKKETARQVVEKLGLLYGSEEEKPSGFELPDHGGLEDDEVPVEEVLNGLEDMSKRSELLHKAFKIFDEDGDGYIDAMELKRVLDCLGLDKGWDMSTIEKMVDVADLNFDGKVDFSEFELMMG 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0868 185 CDD EFh 122 180 IPR002048 GO:0005509
Prci15g0868 185 ProSiteProfiles EF-hand calcium-binding domain profile. 155 185 IPR002048 GO:0005509
Prci15g0868 185 SUPERFAMILY EF-hand 40 184 IPR011992 -
Prci15g0868 185 ProSitePatterns EF-hand calcium-binding domain. 130 142 IPR018247 -
Prci15g0868 185 Pfam EF-hand domain pair 121 184 IPR002048 GO:0005509
Prci15g0868 185 SMART efh_1 121 149 IPR002048 GO:0005509
Prci15g0868 185 SMART efh_1 159 185 IPR002048 GO:0005509
Prci15g0868 185 Gene3D - 37 185 - -
Prci15g0868 185 ProSiteProfiles EF-hand calcium-binding domain profile. 117 152 IPR002048 GO:0005509
Prci15g0868 185 FunFam Calmodulin A 54 185 - -
Prci15g0868 185 PANTHER CALCIUM BINDING PROTEIN 106 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0868 Prci-Chr15 5595251 5596102 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0868 52 184 EF-hand Containing Proteins AT5G44460 38.194 1.07e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0868 - - gmx:100527700 272.322