Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0840 ATGGCTTCCAACGAGTACAATGATGTGCGTCCCGGATACGATGACCACCGCCAGCCACCATCGCAATCTCAAGACCTGGGCTATGATCCGAATTTCGTACCCGATTCTGTGAAGTCATTTGTAGTCCACCTCTACCGCCACATCCGAGAGAAAAATGTGTACGAGATCCACCAGATGTACGAGAACTCGTTTCAAACTCTCTCGGAGCGTCTCTTCAAGGACACTCCGTGGCCTTCTGTGGACGCTGTCGCTAACTACGTTGACAATGATCATGTGTTTTGTCTCCTGTATCGCGAGATGTGGTTTCGTCACCTCTATGCTAGGCTCACGCCAACGCTTAAGCAGAGGATAGATTCCTGGGACAATTATTGTAGTCTCTTTCAGGTTGTGTTGCATGGAGTTGTCAACATGCAGCTGCCCAACCAGTGGTTGTGGGATATGGTGGATGAGTTCGTTTACCAATTTCAGAGCTTCTGTCAATATAGAGCCAAGATGAAGAACAAAACCGAGCAGGAAATTGCAATTTTGAGGCAGTATGATCAGGCTTGGAATGTGTATGGCGTCCTCAACTTCTTGCAAGCTCTTGTCGAGAAGTCCATGATTATTCAGATTCTTGAGCAAGAAAAAGAAGGCCTGGAACAATTTACTGCTACTGATGGGTATGATTACAGCGGAGGGAGTAATGTCTTAAAGGTTTTGGGATATTTAAGCATGGTAGGATTGCTGCGAGTTCATTGTCTTTTAGGTGATTATCATACTGGTCTCAAGTGCTTGCTTCCTATTGATATTAGTCAACAAGGCGTTTACACCAGTGTTATTGGAAGCCACATTACCACCATATATCATTATGGTTTTGCCAATCTTATGTTGCGGAGGTATGTGGAAGCAATTCGTGAATTTAACAAAATTCTCTTGTATATCTATAACAAGCAGTATCATCAGAAATCTACACAGTATGAACAGATACTGAAGAAGAACGAGCAAATGTATGCCTTGCTGGCTATTTGCCTTTCGCTCTGCCCCCAAAACAGACTTGTTGATGAAACAGTGAACTCTCAGTTGCGGGAGAAGTATGGTGAAAAAATGATTAGGATGCAAAGATATGACGATGGCTTTGCTATCTATGATGAGCTCTTTTCATATGCTTGTCCCAAATTCATTACCCCATCAGCACCTAGTTTTGAGGAGCCTCTAGTTAATTACAATCAGGATGCCTATAGACTTCAGTTGAAACTGTTCCTTTATGAAGTGAAGCAGCAACAATTGTTGTCAGGTGTCCGGACCTTCTTGAAAGTCTATTCAACAATCTCTCTTGCGAAACTTGCAAGTTACATGGAAGTAGACGAAGCCAACTTAAGGACTATTTTGATGACATACAAGCATAAAACCCATGCCGTTGATGGTGATGGAAAAGTTATATCCAATGCTGATGTGAATTTCTACATTGATGATGATATGATTCACGTTGCAGAGTCTAAGCCCCCTAAGCGATATGGGGATTACTTCTTGCGTCAGGTGGTCAAGCTTGAAGGCGTGATCAATGAGATAGACGGTGTAAAGCTGGAATAA 1569 0.4289 MASNEYNDVRPGYDDHRQPPSQSQDLGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYENSFQTLSERLFKDTPWPSVDAVANYVDNDHVFCLLYREMWFRHLYARLTPTLKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIAILRQYDQAWNVYGVLNFLQALVEKSMIIQILEQEKEGLEQFTATDGYDYSGGSNVLKVLGYLSMVGLLRVHCLLGDYHTGLKCLLPIDISQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIYKXKQYHQKSTQYEQILKKNEQMYALLAICLSLCPQNRLVDETVNSQLREKYGEKMIRMQRYDDEXFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRTFLKVYSTISLAKLASYMEVDEANLRTILMTYKHKTHAVDGDGKVISNADVNFYIDDDMIHVAESKPPKRYGDYFLRQVVKLEGVINEIDGVKLE 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0840 524 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 29 522 IPR019382 GO:0003743|GO:0005737|GO:0005852
Prci15g0840 524 Pfam RNA polymerase I-associated factor PAF67 115 510 IPR019382 GO:0003743|GO:0005737|GO:0005852
Prci15g0840 524 MobiDBLite consensus disorder prediction 1 28 - -
Prci15g0840 524 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 22 513 IPR019382 GO:0003743|GO:0005737|GO:0005852
Prci15g0840 524 ProSiteProfiles PCI domain profile. 299 498 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0840 Prci-Chr15 5374424 5380054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0840 K15029 - qsa:O6P43_015524 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0840 15 5374424 5380054 Prci15g0840 15 5374424 5380054 ECH