Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0838 ATGGTGAATTCTATGGTAGAACGAGCTACGAGCGACATGCTCATTGGTCCTGACTGGGCAATGAATATCGAGATCTGTGACATGCTGAATGGCGACCCCGGGCAAGCCAAGGATGTTGTTAAAGGTATAAAGAAGCGGATTGGAAGCAAGAATTCAAAAGTTCAACTTCTTGCACTAACTCTACTGGAGACAATCATAAAGAATTGTGGGGACATTGTTCACATGCATGTCGCGGAGAGAGATGTGCTTCATGAGATGGTGAAAATAGCAAAGAAGAAGCCTGATTTTCATGTCAGAGAGAAGATTCTGATTCTTATAGATACTTGGCAAGAAGCTTTTGGAGGACCAAGGGCTAGATACCCGCAATATTATGCTGCATACCAGGACCTGCTGCGTGCTGGGGCAGTATTCCCTAAAAGGTCTGAACAATCTGCACCTGTGTTCACACCTCCACAAACACAACCATTGTCATCATATCCTCAAAATTTACGCAACTCTGAGGCCCATCAGGATGCAGCTGAGTCCTCTGCAGAGCCTGAGTTTCCAACTCTAAGTTTGAGCGAAATTCAGAATGCTCGTGGTATTATGGACGTTCTTGCAGAAATGCTTACTGCAATAGAGCCAAGTAACAAAGAAGGCCTTAGGCAGGAGGTTATTGTTGATTTAGTGGAGCAGTGTCGAACCTACAAGCAAAGGGTGGTACACCTTGTTAATTCAACTTCGGATGAATCGCTGCTATGCCAAGGTCTAGCTCTCAATGATGATCTTCAGCGAGTATTAGCAAAGCATGAAGCCATCGCTTCAGGTGTTTCTGTTGCAAATCAAACAGAGAAAGTGAAGTCTGAGCCTGCTGGAGCACTAGTAGATGTTGGTCCTTTGGTTGATAATGGAGAGGCAAGTAAACAAACTGATGGGAGTTCAAGCGCTGAAGGTGGGTCTCAAACATTGAATCAATTATTGCTTCCTGCTCCTCCCACTTCTAATGGTTCAGCTCCTCATGCTAAGGCTGATCCCAAGATGGACTTGCTCAGTGGTGATGATTATGCCTCGCCAAAAGCAGAGACTTCACTTGCTCTTGTTTCTCTAGGAGAACAGCAACCAACAAATCCCGTGTCTCAGCAGAATGCCCTTGTTCTTTTTGATGTGTTTTCAAATGGCAACAGTGAACTGACTTCCACACAGCTAACCCAGCCAACTAATGTTGGTGGACAGACCAGTCCACTAGCCCCCCACGGTCAACAACAGCAGACGGCCATAACTTCACAAGGTCCATTTTATGCTAATGGAAGTGTGACTAATGTTGGGTCACCTCATTTTGAGCAATCACTTTACTCACAGAGCACAGGTCCTACCTGGAATGGTCAGGTTGCCCAGCAGCAGCAGCAGCTGCCGTCAGGTGTGCAAAACAGTGAATCGTTGCCACCACCGCCGTGGGAAGCTCAACCAACTGATAACGGTAGTCCAGTAGCAGGCAGCAATTATCCCGCATCACTGCAAGTCACTCAAGTGGTTATGACGCATGTTCAGAGTGGTGCACATGCTCAGGGAATTCCGGCATTGGCGAATGACCAAGTTGTTGGAATGTATATGCAGCCGAATGCTAATGGCCCTGTGTCACCGATGAATAGCCATGCTGTTCACAGCAATCCGTTGGGCTTTCACCCTCAGCATATGCAGGGTGGGGCAGGACCATATATGGGTATGGTTTCTCCTCAGTTGCAAGCTGCACCTTTGGCTTCTATGTATCCTCAACAGATGTATGGCAACCAATTCTCGGGATATGGCTACGGTCAGCAACAAGGGGTCCCATACCTTGAGCAGCAAATGTACGGCCTATCTGTTAGAGATGATAATGGTTTGAGAAACTCCTACCAGGTTTCTTCCTCATCTTATATGCCACCAGGCAAACCTTCCAAACCAGAGGACAAGTTATTTGGGGACCTTGTTGACATGGCAAAATTCAAATCTAAACCCACTCCAGGTCGAGCTGGTAGCATGTAA 2001 0.4673 MVNSMVERATSDMLIGPDWAMNIEICDMLNGDPGQAKDVVKGIKKRIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIAKKKPDFHVREKILILIDTWQEAFGGPRARYPQYYAAYQDLLRAGAVFPKRSEQSAPVFTPPQTQPLSSYPQNLRNSEAHQDAAESSAEPEFPTLSLSEIQNARGIMDVLAEMLTAIEPSNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHEAIASGVSVANQTEKVKSEPAGALVDVGPLVDNGEASKQTDGSSSAEGGSQTLNQLLLPAPPTSNGSAPHAKADPKMDLLSGDDYASPKAETSLALVSLGEQQPTNPVSQQNALVLFDVFSNGNSELTSTQLTQPTNVGGQTSPLAPHGQQQQTAITSQGPFYANGSVTNVGSPHFEQSLYSQSTGPTWNGQVAQQQQQLPSGVQNSESLPPPPWEAQPTDNGSPVAGSNYPASLQVTQVVMTHVQSGAHAQGIPALANDQVVGMYMQPNANGPVSPMNSHAVHSNPLGFHPQHMQGGAGPYMGMVSPQLQAAPLASMYPQQMYGNQFSGYGYGQQQGVPYLEQQMYGLSVRDDNGLRNSYQVSSSSYMPPGKPSKPEDKLFGDLVDMAKFKSKPTPGRAGSM 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0838 666 FunFam TOM1-like protein 2 1 148 - -
Prci15g0838 666 MobiDBLite consensus disorder prediction 444 493 - -
Prci15g0838 666 CDD GAT_GGA-like_plant 188 266 - -
Prci15g0838 666 MobiDBLite consensus disorder prediction 299 325 - -
Prci15g0838 666 Pfam VHS domain 3 129 IPR002014 GO:0035091|GO:0043130
Prci15g0838 666 PANTHER TOM1-LIKE PROTEIN 1 658 IPR044836 GO:0035091|GO:0043130|GO:0043328
Prci15g0838 666 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Prci15g0838 666 MobiDBLite consensus disorder prediction 142 181 - -
Prci15g0838 666 MobiDBLite consensus disorder prediction 145 172 - -
Prci15g0838 666 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Prci15g0838 666 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Prci15g0838 666 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Prci15g0838 666 CDD VHS 2 132 - -
Prci15g0838 666 MobiDBLite consensus disorder prediction 624 666 - -
Prci15g0838 666 Gene3D - 183 274 IPR038425 -
Prci15g0838 666 MobiDBLite consensus disorder prediction 288 339 - -
Prci15g0838 666 FunFam TOM1-like protein 2 182 272 - -
Prci15g0838 666 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Prci15g0838 666 SUPERFAMILY GAT-like domain 139 269 - -
Prci15g0838 666 Gene3D - 1 135 IPR008942 -
Prci15g0838 666 MobiDBLite consensus disorder prediction 444 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0838 Prci-Chr15 5360617 5367570 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0838 - - gmx:100809022 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0838 15 5360617 5367570 Prci15g0838 15 5360617 5367570 ECH