Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0822 ATGGCAGCCTTATTATATACGGCATTTACGGTAAAATGTTCTGTTCAGAAAAAACCCGGTGTTGTCTCCCACAATTTCAGCCACTCTACCATTCCAGTATCCTCTGCTTTCAAGCAGATACTGGGATCTCTTCCTCAACTCCCTTTGCAAATCGATGTCCCAAAAAGCCTTACCAGCGCAACGGTTAAAATACTGGACGCTTTTGTGGATTCAGTATTTGAGTTCATTGACCAGCCACTGCTTCCATCTCAGAGTAACTTTGCTCCTGTGGAGGAGTTGGGAGAGCCCATTCTTATCACCGCCATAGAAGGAGATATTCCACATGATTTTCCAGAGGGTGTCTATGTTAGAAATGGTCCGAATCCACTATTTGGAGGATTGAAAACAACCAAATCTATCTTTGGAAGGTCAAGTCACATTTGGGTAGAAGGAGAAGGAATGCTTCATGCTTTGTATTTTAAGAAAGCAAGTGATGGTAGCTGGACGGTCATCTACAAAAACAGATTTGTAGAGACCGAAACTTACAAGCTTGAGAAACAAAGAAACAAGCCTTCATTTCTGCCGGCCATAGAAGGCCATTCACCTGCCATTTTGTCTGCATATCTCCTAAACTGGTTGAGATTTGGTAAAGTGAACAAATACAATAGCAACACCAACGTGTTTGAGCATTCAGGGAAGTTTTACTCGGTTGCTGAAAATCACATCCCACAAGAGATTGACATCTTCACCCTCAAGACCTTAAAAAATTGGGACATCAATGGCGCATGGAGTCGACCTTTTATAAGCCACCCAAAGAAAGATCCAACTACAGGAGTGCTAATTATTATGGGGGTGTCACCAACCAAGCCTTTTGCTACACTTGGAATCATTTCCGATGATGGAAAGAAATTGGTTCATAAAGTGGATATCAAATTGAATAGGTTCAATGTGATCATGGATTTTCCGCTAACCTTGGATCTAAATAGACTTATTAGAGGAGGCCCATTATTAAAGTATAACAAGGAAGGATACGCCAGAATAGGGGTAATGCCACGCTATGGCGATGCCAACTCAATCCAGTGGTTTGAGGTGGAACCAAATTGCACATTTCACATCATCAATTCTTTCGAGGATGCCCACGAGGTTGTAGTGTGGGGATGCAGAGCTCTTGATTCGGTGGTTCCTTGGGTTGACCCTAGTTTGAATCAATTTGAGGCTTTTTCTCATTGTTATGAGTGGAGATTGAATCCGCAAAGTGGGGAAGTTAAGGAGAAGGATCTCAGTGGAACGAAAGTACTGAATATGGATTTTCCTATGATCAATGCAAATTTTGCAGGCATTCAGAATCGATATGGATACACTCAAGTGGTTGATCTTGCAGCTAGCTCCACTGCAGGAGTGCCTAAATATGGAGGTCTAGCCAAGCTCTACTTTGAAAAACCATGCATGGTTATATCTACGAAGGATAAACAACATGAAGAGGCTATAAAGGTGGAATACCACATGTTCGAGAAGAATGTGTTTTGTACAGGAGCAGCTTTTGTCCCTCAAAGTGATGGCGTTGAAGAAGATGATGGTTGGATCGTCACTTTCATTCACAACGAAGATACTGACACATCTCAAGTACATATAATTGACACAAGAAGGTTTTCAGGAGAGGCAGTTGCCAAAATTACAATGCCTCAACGAGTTCCATATGGCTTTCACGGAGCTTTCATGCCAATCTCATTGGAAGCTTAA 1719 0.42 MAALLYTAFTVKCSVQKKPGVVSHNFSHSTIPVSSAFKQILGSLPQLPLQIDVPKSLTSATVKILDAFVDSVFEFIDQPLLPSQSNFAPVEELGEPILITAIEGDIPHDFPEGVYVRNGPNPLFGGLKTTKSIFGRSSHIWVEGEGMLHALYFKKASDGSWTVIYKNRFVETETYKLEKQRNKPSFLPAIEGHSPAILSAYLLNWLRFGKVNKYNSNTNVFEHSGKFYSVAENHIPQEIDIFTLKTLKNWDINGAWSRPFISHPKKDPTTGVLIIMGVSPTKPFATLGIISDDGKKLVHKVDIKLNRFNVIMDFPLTLDLNRLIRGGPLLKYNKEGYARIGVMPRYGDANSIQWFEVEPNCTFHIINSFEDAHEVVVWGCRALDSVVPWVDPSLNQFEAFSHCYEWRLNPQSGEVKEKDLSGTKVLNMDFPMINANFAGIQNRYGYTQVVDLAASSTAGVPKYGGLAKLYFEKPCMVISTKDKQHEEAIKVEYHMFEKNVFCTGAAFVPQSDGVEEDDGWIVTFIHNEDTDTSQVHIIDTRRFSGEAVAKITMPQRVPYGFHGAFMPISLEA 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0822 572 PANTHER BETA-CAROTENE DIOXYGENASE 90 566 IPR004294 GO:0016702
Prci15g0822 572 Pfam Retinal pigment epithelial membrane protein 88 567 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0822 Prci-Chr15 5271313 5275132 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0822 - - gmx:100817738 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0822 15 5271313 5275132 Prci15g0822 15 5271313 5275132 ECH