Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0789 ATGGACCGCTTGCGTCCTCGGAACAGACCGGTCTTTTTTGGATTCACCAATGCTGAGATTGAGAAAATGGAAAAATTGCTTAAAGATTCAGGGGAAGAATCACTGGGCAAGGAGTTTTGCCAAAGACTTACTAAAAGTTTTAACCGCTCCTCTGGTCGCGCTGGCAAACCAGTCATAAAATGGACTGAGATACAGAGTTGGTTTCAGACAAGGCTTCCAGAACCACCCGAAGTCCCCAAAAACAAGTTGACTCATACAAATGGTCTTGTAAGTAAGGAAGTAGGAATTATCCGAGACCCATCAGAGTTGGAATTTGAGGCAAGATCATCAAAAGATGGAGCATGGTATGATGTTGAGAAGTTTCTTGCCCACAGATTTCTCAGCACAGGTGAAGCTGAAGTCCGTGTCAGATTTGTTGGATTTGGAGCTGAGGAAGATGAGTGGGTCAATATAAAAGATGCAGTGAGAGAACGCTCGGTGCCTTTAGAAAATACTGAATGTTCCAACCTAAAAGTTGGAGACCCTGTCTTGTGCTTCCAGGAGAGGAGAGATCAAGCAATTTATTATGATGCCCATGTTTTAGAGATCCAAAGGAAAATGCATGATATCAGAGGCTGCAGGTGTCTCTTCTTGATTCGGTATGATCATGACAACAGTGAGGAAAAAGTTCGCCTGAGGAGACTTTGCCGCAGTCCAAGATCCTAG 705 0.4397 MDRLRPRNRPVFFGFTNAEIEKMEKLLKDSGEESLGKEFCQRLTKSFNRSSGRAGKPVIKWTEIQSWFQTRLPEPPEVPKNKLTHTNGLVSKEVGIIRDPSELEFEARSSKDGAWYDVEKFLAHRFLSTGEAEVRVRFVGFGAEEDEWVNIKDAVRERSVPLENTECSNLKVGDPVLCFQERRDQAIYYDAHVLEIQRKMHDIRGCRCLFLIRYDHDNSEEKVRLRRLCRSPRS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0789 234 Gene3D - 100 161 - -
Prci15g0789 234 Pfam SAWADEE domain 102 229 IPR032001 GO:0003682
Prci15g0789 234 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 11 233 IPR039276 -
Prci15g0789 234 Gene3D - 162 234 - -
Prci15g0789 234 SUPERFAMILY Chromo domain-like 112 154 IPR016197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0789 Prci-Chr15 5066081 5070351 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0789 - - gmx:100801021 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0789 15 5066081 5070351 Prci15g0789 15 5066081 5070351 ECH