Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0785 ATGGATAACGATAGAATACGCGAGAGGGGGAGGCATCAGATCGAGCAGATTCGCCTGCTCGATCACGAAGAATTGGAGGTCGAGGAAGGTGATAACCTGGAAGGCGATAGGATGCAGGTAGTAGTGGGTGATGATAGAATACTCGAGAGGGAGAGGCTTCAGATCGAGCACATTCGCCAGCTCGACCTCGAAGAATTGCAGGTTGAGGAAGTGGATGACCTCCGAGACTCATCCGATGAGGACACCAACGGCCGTGCTGGCCGTGCGAGGCCAGCTTCATCCGATGATTTCACCTTCGATACGTGTATAACGTGTTTGCATACATATCTGGGTGAGGTTGAGGACACACACCACAGGACTGCTCTCTTGGACGGTGGTGTTCGTTTAAGCCTCCCACTTTTCTATCTCGATGGAGTTGTACTCTTTCCGGGGGCTACTCTTCCCCTGAGAGTTATTCAACCCAATTATGTTGCTGCTGTTGATCGGGCACTGAGCCAAGTTGATGTTCGTTACACTATTGGTGTGATTAGAGTTCAGAGGGATACTGAAAATCATAGGACAAAATTGGCAAGAATTGGAACAACTGCAGAGATTCGACAATACAGGCGGCTAGAGGATGGTTCACTGAATGTGGTTACCCGTGGACAACAGAGATTTCTGCTAAGACGGTGTTGGTCTGATGTGGAAGGAGTGCCTTGTGGAGAGATTCAAATAATTGAGGAAGATCTACCATCAAGAACTCCCAAAGATGCTTTGGTAAAATTAGCTCCATTAAGCAATCTACCTCATAACCGTGGCATCTCACACATGGCTTCAAATTTTTCTTGCACTAAGTTGCATGGGTCGAAAAATGTGGATGATGATTCAGATGGGAGCTTTGAGAGCTTTGAGGATGGACTATCACCAATGGAAAGGAGAATCCACCAGTCAATCATTGGTTCTGGTCATGATCATGATATTATGGATGAATCATCTAGCAGTGATTATGAAGAATGCAGGCATGAGTCTGATCAGGAAATTAGATGTAGCCTAAATGATGACATGACAAGGTCATTGCTATCTGACCGTGGAAAACGAGCTGTAAATATAGACTGGATTGGTGGTAGCTGTTCCACTTCAGGTTCAGGCAAGAAACCCTGCAAAATGGAAGCTTGTGCAAGCGCCAACTTCTCTCATGGAATTCCAAGAGCATTCTGGCCCCATTGGGTATACCGGATGTTTGACTCCTACTGCCTTGCACAGAGGGCAGCGGATTTGTGGAGGAATGTGGTTGGGACGCCAAGCATGGATGGTCTTGTGAAGAAGCCTGATGTTTTATCATTTTATATTGCCAGTAAAATACCTGTCTCCGAATCTACAAGGCAGGAGCTTTTGGAGATAGATGGTATCTCATATAGATTGCGTAGGGAGATTGAATTGCTAGAGTGTGTTAATCTTGTTCGATGTAGAAACTGCCAGACTATCATTGCAAGGCGGAGTGATATGTTGGTGATGTCCAGTGAGGGTCCTCTTGGTGCTTATGTTAATCCAGGTGGTTATGTGCATGAGATCATGACTCTGCACAACGCAAGTGGCTTAGCGCTTATTGGGCGAGCAACTACGCAGTACAGTTGGTTTCCAGGATATGCATGGACAGTAGCCAACTGTGCTACGTGTGAAAGACAAATGGGGTGGCTTTTTACATCAACAAACAGAAAACTGAAACCCAGATCATTTTGGGCGATACGGAGTTGTCAAGTTGCGGAAGAGATGCGCTAA 1758 0.4619 MDNDRIRERGRHQIEQIRLLDHEELEVEEGDNLEGDRMQVVVGDDRILERERLQIEHIRQLDLEELQVEEVDDLRDSSDEDTNGRAGRARPASSDDFTFDTCITCLHTYLGEVEDTHHRTALLDGGVRLSLPLFYLDGVVLFPGATLPLRVIQPNYVAAVDRALSQVDVRYTIGVIRVQRDTENHRTKLARIGTTAEIRQYRRLEDGSLNVVTRGQQRFLLRRCWSDVEGVPCGEIQIIEEDLPSRTPKDALVKLAPLSNLPHNRGISHMASNFSCTKLHGSKNVDDDSDGSFESFEDGLSPMERRIHQSIIGSGHDHDIMDESSSSDYEECRHESDQEIRCSLNDDMTRSLLSDRGKRAVNIDWIGGSCSTSGSGKKPCKMEACASANFSHGIPRAFWPHWVYRMFDSYCLAQRAADLWRNVVGTPSMDGLVKKPDVLSFYIASKIPVSESTRQELLEIDGISYRLRREIELLECVNLVRCRNCQTIIARRSDMLVMSSEGPLGAYVNPGGYVHEIMTLHNASGLALIGRATTQYSWFPGYAWTVANCATCERQMGWLFTSTNRKLKPRSFWAIRSCQVAEEMR 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0785 585 ProSiteProfiles Lon N-terminal domain profile. 131 476 IPR003111 -
Prci15g0785 585 FunFam Blast:Protein cereblon homolog 473 585 - -
Prci15g0785 585 Pfam ATP-dependent protease La (LON) substrate-binding domain 131 475 IPR003111 -
Prci15g0785 585 PANTHER CEREBLON 80 578 - -
Prci15g0785 585 Gene3D - 408 473 - -
Prci15g0785 585 Gene3D Peptide methionine sulfoxide reductase. 474 585 - -
Prci15g0785 585 CDD CRBN_C_like 480 576 IPR034750 -
Prci15g0785 585 SMART lon_5 130 476 IPR003111 -
Prci15g0785 585 Gene3D - 118 240 IPR046336 -
Prci15g0785 585 FunFam Lon protease homolog 408 472 - -
Prci15g0785 585 SUPERFAMILY PUA domain-like 130 475 IPR015947 -
Prci15g0785 585 MobiDBLite consensus disorder prediction 70 93 - -
Prci15g0785 585 ProSiteProfiles CULT domain profile. 477 584 IPR034750 -
Prci15g0785 585 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 480 571 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0785 Prci-Chr15 5049822 5057616 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0785 K11793 - qsa:O6P43_019493 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0785 15 5049822 5057616 Prci15g0785 15 5049822 5057616 ECH