Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0668 ATGCATGCATACACAGTCCAGGCGTCAAGTTCCATAAATATGGACGCCAAGTTGTCAATCACATTCATCCTCTTCTCTGCAACAATTCAGCTCCTCGCCTTCACCAACGCCATTGCTTTAGACCACTGTGCTTCTGAACCCCTCCACTTGGACGTCGCCCTCATTCCCATTTACTCCAAATGCTCTCCCTTCCAGCTTCCCAGCGCTCGCTCATGGCTCGACACTCTCATGATCATGGCATCCACGGACTCCCAACGCCTCCACTACTTATCTTCCCTTCTGCCTAAGAAGCGCTCCACGTCTGTCCCTATCGCCTCCGGCCTCGCTTTCAATATCGGTAACTACGTCGTCCGGGTCAAGCTCGGCACTCCCGGCCAGCTCATGTTCATGGTCCTGGATACTAGTAGTGATGAGGCCTGGGTCCCATGCTCCGGTTGTACGGGCTGCTCCGCCGCCGTCACTTTTTCACCCAAAGCTTCTGCAACATACAGGTCATTGGATTGCTCCGTTCCCCAGTGCAGCCAGGTCCGTGGATTCTCGTGCCCCGACGCGGGATCTGACCCGTGTTCGTTTAACCATTCCTACGCTGGTTCGTCGTTCTCCGCCACGCTGGTCCAAGACTCTCTCGGACTAGCATCTGATATCATCCCCAATTATGCTTTCGGCTGCGTCAATAACGTCGCCGGCGGTCCACTCCCCTCCCAAGGGCTGCTGGGTCTGGGTCGGGGACCCTTGTCGTTATTTTCGCAATCGGCCGGATCACTCTACAGAGGAGTATTCTCCTACTGCCTTCCCAGTTTCAAGTCATATTTCTTCTCAGGGTCGTTGAAGTTAGGACCCAGAGGTCAACCCAAACGCATCCGTACCACCCCACTATTGCGTAATCCCCGCCGGCCGTCTCTGTACTACGTGAACCTGACCGGTGTCAGCGTGGGTCGGGTCCACGTCGGTTTACCTAGCGAGCTCCTGAGTTTCAACCCTAACACCGGAGCTGGAACGATTATAGATTCAGGTACGGTGATTACCCGATTCGTGGAACCAGTGTACGGTGCAATCAGGGACGAGTTCAGAAGACAGGTGAAAGGTCCTTTTTCGAGCTTGGGGGCATTTGACACTTGCTTCGTGAAGAGCTACGAGACATTGGCTCCCACCATTACATTACATTTCTCAGGGTTGGAGCTGAAATTGCCATTGGAGAACAGCTTCGTACATAGCAGTTCGGGGTCGCTAGCCTGCTTGGCTATGGCGGCGTCACCCAATAATGTGAACTCGGTGTTGAATGTGATAGCCAATTTGCAGCAGCAGAACCTTAGGATTTTGTTTGATACTGTCAATAATAAGGTTGGAATAGCCCGTGAACTCTGTAACTAG 1371 0.5317 MHAYTVQASSSINMDAKLSITFILFSATIQLLAFTNAIALDHCASEPLHLDVALIPIYSKCSPFQLPSARSWLDTLMIMASTDSQRLHYLSSLLPKKRSTSVPIASGLAFNIGNYVVRVKLGTPGQLMFMVLDTSSDEAWVPCSGCTGCSAAVTFSPKASATYRSLDCSVPQCSQVRGFSCPDAGSDPCSFNHSYAGSSFSATLVQDSLGLASDIIPNYAFGCVNNVAGGPLPSQGLLGLGRGPLSLFSQSAGSLYRGVFSYCLPSFKSYFFSGSLKLGPRGQPKRIRTTPLLRNPRRPSLYYVNLTGVSVGRVHVGLPSELLSFNPNTGAGTIIDSGTVITRFVEPVYGAIRDEFRRQVKGPFSSLGAFDTCFVKSYETLAPTITLHFSGLELKLPLENSFVHSSSGSLACLAMAASPNNVNSVLNVIANLQQQNLRILFDTVNNKVGIARELCN 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0668 456 Gene3D Acid Proteases 280 456 IPR021109 -
Prci15g0668 456 PANTHER ASPARTYL PROTEASES 41 449 IPR001461 GO:0004190|GO:0006508
Prci15g0668 456 SUPERFAMILY Acid proteases 108 455 IPR021109 -
Prci15g0668 456 FunFam Aspartyl protease AED3 280 456 - -
Prci15g0668 456 ProSiteProfiles Peptidase family A1 domain profile. 115 451 IPR033121 -
Prci15g0668 456 FunFam aspartyl protease AED3 94 279 - -
Prci15g0668 456 Pfam Xylanase inhibitor C-terminal 302 451 IPR032799 -
Prci15g0668 456 Gene3D Acid Proteases 92 279 IPR021109 -
Prci15g0668 456 Pfam Xylanase inhibitor N-terminal 115 279 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0668 Prci-Chr15 4362146 4363988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0668 99 456 Miscellaneous Gene Families AT1G77480 27.157 1.76e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0668 - - gmx:100788630 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0668 15 4362146 4363988 Prci15g0668 15 4362146 4363988 ECH