Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0665 ATGCTACAATGCAGATTGATGGGATTTTTCTTCCTCAATCTCTATGAATGGTCCCTGAGCGGCATTGCCATTTTAATGAGTGGAGATGGCGGTACTTCTCTACCCTCTTCTCAGCATGGGCCACCAGAGCATCAGTGCTCACGCGGCAGCAATGGCAATGCGATTTTCAAGACTGGGCCACTTTACATATCTTCTAAAGGAATTGGATGGACATCCTGGAAGAAAAGGTGGTTTGTTTTAACACGCACTTCACTGGTTTTCTTCAGAAGTGATCCAAGTGCTGTTCCTCAGAAGGGGGGTGAAGTGAATTTAACGCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTGTCAAAGCAGATAAGAAACTTTTAACCGTGCTGTTTCCTGATGGACGAGCTTTCACACTTAAGGCTGACACTGCAGAGGATTTACATGAATGGAAGACTGCACTTGAGAATGCTTTGGCACAAGCCCCGGGTGCTTCTGATGTAACAGGGGAAAATGGTATCTTTAGGAACGATCAGACTGATTCAATTGATATTTCTTTGGACCAGTCAAAGGATGTAGAACCAGCAAAATCTACAGTTGTTGGCCGGCCAATTTTACTTGCTCTTGAGGATGATGATGGAGCTCCATCTTTTTTGGAGAAAGCCCTTAGGTTCATAGAAGAGCATGGAGTCAAAGTTGAAGGGATCTTGCGACAGGCAGCTGCTGTTGATGATGTTGAATATCGAGTTCAGGAATATGAACAGGGAAAAACTGAATTCTCTGCTGATGAGGATCCACATGTTGTTGCCGATTGTTTGAAGTTTGTACTCAGGGAATTACTTTCATCTCCAGTCCCTGCATCTTGCTGCAAGGCTCTGTTAGAAGCATGCCGAACTGAACGTGCTGGTAGGATTTCTGCTATCTGTGCTGCAATATGTGAGACTTTCCCTGAACCAAATCGCCGTTTATTGCAAAGAATACTCCAAATGATGCAAACCGTGGCTTCCCACAAAGCTGTGAATAGAATGAGCTCCTCCGCTGTGGCAGCTTGCATGGCACCCTTACTTCTTCGCCCCCTTCTCGCTGGGGAATGTGACATTGAAAATGATTTTGATGTGGGTGGTGATGGTTCTGTTCAACTTCTACAAGCAGCTGCCGCAGCTAACCATGCTCAAACGATTGTTATAACGTTATTGGAAGAATATGACAGCATATTTGGGGAGGAGGGAACTGGGTCCCCGGGCATATACTCTGATTCAGAAGAGAGTGGATCTGGGAGCGAGGAGGGTACTGAAGATGAGGAATCATATGATGATGAAGATTATGATGATGACTGTGATGATGAGTGTGATGAAGAATCGATACAAGAGTCCGATGCAGATGCAGAGGGAAGTGAGACTGAAGACTCAGGGTGCAAGGATGATAAGAAACGTGATCATTCAAGGTCAGATGTAAAATCCTCTGGTGACAAGGAAGATCCTAAAGTCAACCAGATATCATCACAGCCAAGTGAAGTCTCACTATCTCCGGATGTTGCTGTCAAGAGCCGTGAAAACCTGACGAGTTCAACCAAGACTGCTCGTGCTGAAAAGTCCAGCACACCTGCTAACTTAGTTGAAGTTGTTTCCACTGACCAGAGTACAGCACATAATTCGACTTGTCCTGGTGACAACAAATCAATGGACATATATGATGATCCAGCGCATGCTCCGAGCCACACAATATTGGGGCGTACTTCCGTAAGTAAATTTGCAATGAAGAATCTTACCATGGAAACTGTTGATTCTTCTAAAGAGGCAGCTGAAATCGAGAATCTTGAAGCTATCAAGATAGAATTGCAAAACCAAATCACGGAGGAGTCTAACGCAAACCTGCAATCTTATCTGGAAAAACAAAAGAAATCCATGCATGAGCGTCGCCTGGCTCTTGAGCAAGATGTGGCTAGGCTACGGGAACAGCTGCAAAAGGAGAAGAATTATTGGGCAACTCGAGAAGCAGGAAACAAGTATTCTCCTAGATCCTCATCCGATTCAACCAGTGATGAAAAGACCAAGGCAGACCTTGAGGAAATAGCTCTCATAGAAGCAGATCTCACCAAGTTACGGCAGCGGATTGATGATTTTGGCAGGCGGTTTAATTTACAGCATGAGCACACCTCAAATCATGAAACAAAATTGAAGAATAAGCTGGATACTGAAGATGCGGTTAATTGTCAGTCTCAGATTGAAAGGTCAAAAAACAAGGAAATTCGGTATGGTGGAACTGAAAGTGAGAATGAGAAAAAGTCGGAACCAACATCTTTATTGAACAAATATACTCCTCAAGCGACTTCCAAAAAAGTTGGGGCAAAGGTTGAGCATCAGGCATCCAACTTCACTACTTCTAGACTGACGAAACTGTCTACCAGACTTAACTTTCTGAAGGAGCGTCGAAATCAAATTCAGCAACCACAGCCATCTCTCAGTAATAAGTCTCGAGTATCTGAAACTCATTCTGTATCAAACCCAGAAAAGGGCAGAGCTACGGACAGCACCCAGCCATCCCCGATTCCAGATAAAGGTTCAGGCAAAGAAACTTATTCGCTCCAAAATTCGGATAAAATGAGAAAATCAGATGGTCAGTCAACCCATCACCAAGATAAATGGAATCAAAATCAATCCTCGGAAAGAGGAAGGTCCGAAGGCTATCAGTCTTATAATGTGGATAAAGGTCGATGA 2712 0.4406 MLQCRLMGFFFLNLYEWSLSGIAILMSGDGGTSLPSSQHGPPEHQCSRGSNGNAIFKTGPLYISSKGIGWTSWKKRWFVLTRTSLVFFRSDPSAVPQKGGEVNLTLGGIDLNNSGSVVVKADKKLLTVLFPDGRAFTLKADTAEDLHEWKTALENALAQAPGASDVTGENGIFRNDQTDSIDISLDQSKDVEPAKSTVVGRPILLALEDDDGAPSFLEKALRFIEEHGVKVEGILRQAAAVDDVEYRVQEYEQGKTEFSADEDPHVVADCLKFVLRELLSSPVPASCCKALLEACRTERAGRISAICAAICETFPEPNRRLLQRILQMMQTVASHKAVNRMSSSAVAACMAPLLLRPLLAGECDIENDFDVGGDGSVQLLQAAAAANHAQTIVITLLEEYDSIFGEEGTGSPGIYSDSEESGSGSEEGTEDEESYDDEDYDDDCDDECDEESIQESDADAEGSETEDSGCKDDKKRDHSRSDVKSSGDKEDPKVNQISSQPSEVSLSPDVAVKSRENLTSSTKTARAEKSSTPANLVEVVSTDQSTAHNSTCPGDNKSMDIYDDPAHAPSHTILGRTSVSKFAMKNLTMETVDSSKEAAEIENLEAIKIELQNQITEESNANLQSYLEKQKKSMHERRLALEQDVARLREQLQKEKNYWATREAGNKYSPRSSSDSTSDEKTKADLEEIALIEADLTKLRQRIDDFGRRFNLQHEHTSNHETKLKNKLDTEDAVNCQSQIERSKNKEIRYGGTESENEKKSEPTSLLNKYTPQATSKKVGAKVEHQASNFTTSRLTKLSTRLNFLKERRNQIQQPQPSLSNKSRVSETHSVSNPEKGRATDSTQPSPIPDKGSGKETYSLQNSDKMRKSDGQSTHHQDKWNQNQSSERGRSEGYQSYNVDKGR 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0665 903 SMART RhoGAP_3 211 401 IPR000198 GO:0007165
Prci15g0665 903 SUPERFAMILY PH domain-like 30 158 - -
Prci15g0665 903 ProSiteProfiles Rho GTPase-activating proteins domain profile. 205 404 IPR000198 GO:0007165
Prci15g0665 903 MobiDBLite consensus disorder prediction 423 463 - -
Prci15g0665 903 MobiDBLite consensus disorder prediction 661 681 - -
Prci15g0665 903 Pfam Leucine-zipper of ternary complex factor MIP1 634 709 IPR025757 -
Prci15g0665 903 MobiDBLite consensus disorder prediction 742 763 - -
Prci15g0665 903 CDD RhoGAP 214 352 - -
Prci15g0665 903 MobiDBLite consensus disorder prediction 405 564 - -
Prci15g0665 903 CDD PH 57 153 - -
Prci15g0665 903 Coils Coil 594 621 - -
Prci15g0665 903 MobiDBLite consensus disorder prediction 808 903 - -
Prci15g0665 903 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 38 826 - -
Prci15g0665 903 ProSiteProfiles PH domain profile. 54 158 IPR001849 -
Prci15g0665 903 MobiDBLite consensus disorder prediction 742 786 - -
Prci15g0665 903 SUPERFAMILY GTPase activation domain, GAP 209 406 IPR008936 -
Prci15g0665 903 Coils Coil 631 658 - -
Prci15g0665 903 MobiDBLite consensus disorder prediction 464 491 - -
Prci15g0665 903 SMART PH_update 55 160 IPR001849 -
Prci15g0665 903 Pfam PH domain 57 157 IPR001849 -
Prci15g0665 903 Gene3D Rho GTPase activation protein 183 406 IPR008936 -
Prci15g0665 903 MobiDBLite consensus disorder prediction 808 867 - -
Prci15g0665 903 MobiDBLite consensus disorder prediction 492 556 - -
Prci15g0665 903 MobiDBLite consensus disorder prediction 868 885 - -
Prci15g0665 903 Gene3D - 43 159 IPR011993 -
Prci15g0665 903 Pfam RhoGAP domain 214 357 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0665 Prci-Chr15 4334896 4352390 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0665 - - gsj:114415231 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0665 15 4334896 4352390 Prci15g0665 15 4334896 4352390 ECH