Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0640 ATGATGAGGAGCGTTAACAGAGACGCCGAAGAAAAGAATGACAGCCTCAGGCAGCCTCTGTTGCCAGAGTCTTCGCCCGAGGATGGGTCCCCCGTTCAGCAAAATCAACTTGCAACCAAGGTTTGGATCGAGTCCAAGAAGCTATGGCTGATCGTGGGTCCCTCCATCTTCAGCCGCGTGGCGTCGTTCACCATGAACGTCGTCACCCAAGCCTTCGCCGGTCACCTCGGTGATGTTCAGCTCGCTTCCATTTCTATTGCCAACACTGTCATCGTCGGCTTCAACTTCGGCCTCCTCCTGGGGATGGCAAGCGCATTGGAGACACTGTGCGGGCAGGCGTTCGGGGCAAAGAGATACCACATGTTGGGGATATATATGCAGAGGTCTTGGATAGTTCTGTTTATGTGCTGCTTCTTGCTGTTGCCGCTGTACGTGTTTGCGTCTCCCATCCTGAAATTGTTGGGACAGCCAGATGACGTGGCGGCGGAGTCCGGGGTGGTGGCTCTGTGGCTAATACCCCTGCACTTCAGTTTTGCCTTCCAGTTCCCGCTCCAGAGGTTCCTACAGTGCCAGCTCAAGACCTATGTCATCGCTTGGGTTTCATTGGCGGGTCTGGTGGTCAACGTGCTCGTCAGCTGGCTGCTGGTATACGTCTGGGATGTTGGAGTGGTGGGTGCGGCCATTTCTCTGGACATCTCGTGGTGGGTACTGGTGTTCGGCATGTATGCGTATGTGGCTTGCGGTGGATGCCCTTTGACTTGGACGGGACTCTCGATGGAAGCCTTCTCAGGGCTCTTGGAATTTCTCAAGCTCTCTGCTGCTTCCGGGGTCATGCTATGTTTAGAGAACTGGTACTATAGGATACTGATACTCATGACGGGGCATTTGAAGAATGCCACAGTCGCGGTGGATGCGCTGTCAATATGTATGACTATAAACGGGTGGGAAATGATGATTCCTCTGGCATTCTTCGCCGGCACCGGGGTGAGGGTGGCGAACGAGCTCGGAGCTGGGAACGGGAAAGCAGCAAAATTTGCGACTCAAGTATCAGTCGCAGAGTCAACGGTGATCGGGCTGTTCTTTTGCGCAGTAGTGATGGGATTTCGCGAACAGCTGGCGTACATATTCACGTCCAGTTCAGATGTACTCGAAGCCGTCAATGGCATGGCCTTCCTCTTAGCCGTCACCATACTCCTCAACAGTGTTCAGCCAGTATTGTCAGGAGTGGCAGTGGGCTCGGGATGGCAAGCATCAGTAGCATATATTAATTTAGGATGCTACTACATTATTGGGCTCCCTCTCGGATTTCTCATGGGATGGGTTTTCAAGCTTGGCGTCGAGGGCATTTGGGGGGGAATGATATTCGGTGGCACGGGAATTCAGACGCTCGTGCTGCTCTTCATAACAGCAAGACGTGATTGGGACAATGAGGCCAAGATAGCCCGCTCCCGAGTGAACAAGTGGTCCACTCCTAATCCTAATAACACCGGCGATTCAACAGAGTCCTCCCATTCACCACGACCGTAA 1527 0.5344 MMRSVNRDAEEKNDSLRQPLLPESSPEDGSPVQQNQLATKVWIESKKLWLIVGPSIFSRVASFTMNVVTQAFAGHLGDVQLASISIANTVIVGFNFGLLLGMASALETLCGQAFGAKRYHMLGIYMQRSWIVLFMCCFLLLPLYVFASPILKLLGQPDDVAAESGVVALWLIPLHFSFAFQFPLQRFLQCQLKTYVIAWVSLAGLVVNVLVSWLLVYVWDVGVVGAAISLDISWWVLVFGMYAYVACGGCPLTWTGLSMEAFSGLLEFLKLSAASGVMLCLENWYYRILILMTGHLKNATVAVDALSICMTINGWEMMIPLAFFAGTGVRVANELGAGNGKAAKFATQVSVAESTVIGLFFCAVVMGFREQLAYIFTSSSDVLEAVNGMAFLLAVTILLNSVQPVLSGVAVGSGWQASVAYINLGCYYIIGLPLGFLMGWVFKLGVEGIWGGMIFGGTGIQTLVLLFITARRDWDNEAKIARSRVNKWSTPNPNNTGDSTESSHSPRP 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0640 508 MobiDBLite consensus disorder prediction 485 508 - -
Prci15g0640 508 MobiDBLite consensus disorder prediction 1 17 - -
Prci15g0640 508 MobiDBLite consensus disorder prediction 1 33 - -
Prci15g0640 508 NCBIfam MATE family efflux transporter 54 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci15g0640 508 CDD MATE_eukaryotic 44 479 IPR045069 GO:0042910|GO:1990961
Prci15g0640 508 PANTHER MULTIDRUG RESISTANCE PROTEIN 37 474 - -
Prci15g0640 508 Pfam MatE 54 214 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci15g0640 508 Pfam MatE 276 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0640 Prci-Chr15 4163424 4166563 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0640 K03327 - qsa:O6P43_019597 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0640 15 4163424 4166563 Prci15g0640 15 4163424 4166563 ECH