Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0626 ATGGCGCTTCGTTTTGAGATTCTTGGCCGGTTCAACCGGGCTCGTGCAGCTCGATTGACACTCCCCCAATACGTGTGCCAGACGCCTTTGTTTATGCCAGTGGGCACACAAGGAACAATAAAAGGACTGACAACAAACCAGCTCGAGGAGATTGGTTGCCAAATAATACTTGGAAATACTTACCACTTGGCCCTTCGACCCACTTCTGAACTTCTTGATGAAGCTGGTGGTCTACATAAATTTATGAACTGGCCACGGGCTCTACTTACAGACTCTGGTGGCTTTCAAATGGTATCACTATTGCATCTTGCTGATATCACTGAAAAAGGTGTGACATTTCAGTCACCAGTTGATGGAAAACCAATGCTCCTAACCCCTGAGGAATCTATTCAGATCCAAAACAGAATAGGAGCAGATATTATCATGGCTCTTGATGATGTTGTTAGGACCACTATTACTGGTCCACGAATAGAGGAAGCCATGTATCGAACGCTCAGATGGATAGACAGATGTATAGCAGCACACAAGAGACCACATGAGCAGAACTTGTTTGGTATCGTACAAGGTGGTTTGGATCCTGTGTTGAGCTATGCTATTGGTGGTCTTGCCGGTGGTGAGGATAAAGATTCATTTTGGCGTGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAAGATAAACCACGATATGTTATGGGAGTTGGTTATCCACTTGATATAGTTGTTTGTAGTGCTTTGGGTGCCGACATGTATGACTGTGTTTATCCTACCCGTACTGCACGCTTTGGCACTGCTCTTGTTCCTCAGGGAGTACTGAAACTCAAACACAGAGCCATGGCTGATGACACTCGTCCCATCGATCCTTCCTGCTCTTGTATGGTGTGCAAGAACTACACCAGGGCTTACATCCATTGTCTTGTGACAAAAGACGCTATGGGGTCTCAGCTTCTGTCATATCATAATTTGTATTATATTATGCAGCTCAGCAGAGATCTATACTCATCAATAACCGAGGGAAGGTTCCCAGAGTTTGTATGTGACTTTCTACATAAAATGTTCCCGGAAGGTGATGTTCCAGAATGGGTCTGCAACGCTATGGAAGTGGCTGGAATTGACATTTCTTCCTGTTGTGCTCCGTTCTCATCATATCAAGAACGCAACCCCGAAAATTGTTTTAGGGAGGAAGGGATGGAAATGAAGTCGGGCACACTTTGA 1212 0.4521 MALRFEILGRFNRARAARLTLPQYVCQTPLFMPVGTQGTIKGLTTNQLEEIGCQIILGNTYHLALRPTSELLDEAGGLHKFMNWPRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVRTTITGPRIEEAMYRTLRWIDRCIAAHKRPHEQNLFGIVQGGLDPVLSYAIGGLAGGEDKDSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPQGVLKLKHRAMADDTRPIDPSCSCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYIMQLSRDLYSSITEGRFPEFVCDFLHKMFPEGDVPEWVCNAMEVAGIDISSCCAPFSSYQERNPENCFREEGMEMKSGTL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0626 403 NCBIfam tRNA guanosine(34) transglycosylase Tgt 5 351 IPR004803 GO:0008479|GO:0101030
Prci15g0626 403 Gene3D - 1 352 IPR036511 GO:0006400|GO:0016763
Prci15g0626 403 SUPERFAMILY tRNA-guanine transglycosylase 1 350 IPR036511 GO:0006400|GO:0016763
Prci15g0626 403 NCBIfam tRNA-guanine transglycosylase 5 351 IPR002616 GO:0006400|GO:0016763
Prci15g0626 403 Pfam Queuine tRNA-ribosyltransferase 13 351 IPR002616 GO:0006400|GO:0016763
Prci15g0626 403 Hamap Queuine tRNA-ribosyltransferase [tgt]. 3 350 IPR004803 GO:0008479|GO:0101030
Prci15g0626 403 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 2 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0626 Prci-Chr15 4073847 4082643 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0626 K00777 - pvy:116132986 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0626 15 4073847 4082643 Prci15g0626 15 4073847 4082643 ECH