Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0574 ATGCAGCTGTCAGCCATTGTCCTTCAGTGTTTGCTTGTGCTCTCTCAATGGGCGGCCCGTGCCGAGTTAACTCAGTCGCCTCCTTTTGCCTGTGACTGGTCTAGTCCCGCAACCAGATCCTACCCATTCTGCAATCCCAAGCTCGGCGTGTCTCGAAGAGCCCAGGACCTGGTGTCTCGCCTCTCATTGGACGAGAAGCTCGCCCAGCTAGTCAACAACGCACCTTCCATTCCTCGACTCGGCATCCCCGCATACCAGTGGTGGAATGAAGCTTTGCACGGAGTCTCCTCCGTCGGACGTGGCATCCGATTCAATGGCTCCATTTCTTCTGCAACTAGCTTCCCTCAAGTCATCCTCTCTGCTGCTACCTTTGACTCCCTCCTCTGGTACAGAATCGGTCAGGCCATTGGAGCGGAAGCGAGAGCAATCTATAATGCAGGGCAAGCCACGGGCATGACTTTTTGGGCTCCGAACATTAACATCTTCAGGGATCCGAGATGGGGAAGAGGGCAAGAGACAGCCGGGGAAGACCCGCTGGTTAATTCCAAGTACGCTGTGTCGTATGTGAGGGGAGTCCAAGGCGATTCCTTCCAGGGAGGCAAACTCAGAGGTCATCTTCAAGCTTCCGCTTGTTGCAAGCATTTTACGGCCTACGATTTGGACAACTGGAAGGGTGTGAATCGCTTCATCTTCGATGCTCGCGTGACTTCACAAGATTTAGCGGACACATATCAGCCTCCATTTCGGAGTTGCGTAGAGCAAGGACGAGCAAGTGGGATAATGTGCGCTTACAATCGAGTGAATGGGGTTCCAAACTGCGCAGATTTCAATCTCTTGACTAAAACCGCCAGAAGACAATGGGGTTTTCATGGGTATATCACTTCCGATTGCGGCGCAGTTTCACTCCTTCATGATGATCAAGGATATGCAAAATCGGCGGAGGATGCTGTGGCCGATGTCCTTCGGGCTGGAATGGATGTAGAGTGCGGTGATTACTTGACGAAGTATGTTAAAGCAGCAGTGACGCAGAAAAAGTTACCAATATCTCAAGTAGATCGTGCACTTCACAACCTGTTCTCAATCAGAATAAGGCTGGGTCTGTTCGATGGGAATCCAGCCAAACTGTCGTTCGGCATGATCGGACCAAACGAAGTGTGTTCGAAAGATCACCTGTATTTAGCTCTTGAAGCTGCCAGAAATGGCATTGTCCTTTTGAAGAACTCTGCCAGACTTCTCCCGCTCCCTAAAACAAACCCCACTATTTCCCTCGCATTCATAGGTCCTAACGCCAACGCTTCTCCTCTAACTCTGCTGGGAAACTATGCGGGCCCTCCCTGTAAAGTCGTGACGCCATTGCAGGCCTTTCAGCACTATGTTAAGAACACCATCTATCATCCTGGCTGTGATGGCGGAGTCAAGTGTCCTTCGGCTCAGATAGACAAAGCCGTGGAAATCGCCACAAAGGCGGATTACGTGGTGCTGATGATGGGATTGGATCAGAGTCAAGAGAGAGAAGATCGTGATCGTGTTCACCTGGACTTACCTGGCAAGCAGCAGGAGCTCATACATAGCGTTGCTAAAGCTTCCAAGAGACCTGTCATTCTGGTGATCTTTTCTGGAGGCCCTCTTGATATTTCTTTGGCCAAGTATGACAACAAAGTTGGAAGCATCTTCTGGGCCGGTTATCCTGGCGAAGTTGGAGGGATCGCACTTGCTCAGATTATCTTTGGCGATCACAACCCAGGAGGAAGACTACCGATGACTTGGTATCCAAAAGATTTCATAAGAGTGCCGATGACGGACATGAGGATGCGAGCAGATCCAACTTCGGGGTATCCGGGAAGGACTTACCGGTTTTACACGGGTCCAAAGGTGTATGAGTTTGGGTATGGCCTAAGCTACTCCAAATATTCCCACGAGTTCGTATCTGTGACGCAGAACAAGCTTCTCTTGAATCAATCGTCGTCTTATTTGATAGTTGAGAATTCGGAAACAATTCGTATCAAATCAGTGTCAGAGTTGGGCGCCAAAGTGTGCCAGAGCATGTCAGTGTCAGTGACGGTGGGGGTTGAAAATGAAGGAAGCATGGCGGGGAAGCATTCGGTGTTGCTATTCACAAGGCATGCGAAGCAGAGGAATGGAAATCCGATCAAACAGTTGGTGGGTTTTGAGAGTGTGATGCTAGATGCAGGGGAAAGGGCCCAAGTTGAATTTGAAATAAGCCCTTGCGAGCATCTTAGCAGAGCAAGTGAGGTTGGTTCCAAAGTAATTGAAGAAGGGTCCCATCTCTTGATTGTTGGGGATGAAGAGTATCCAATTGATGTCATTTTCTGA 2334 0.4979 MQLSAIVLQCLLVLSQWAARAELTQSPPFACDWSSPATRSYPFCNPKLGVSRRAQDLVSRLSLDEKLAQLVNNAPSIPRLGIPAYQWWNEALHGVSSVGRGIRFNGSISSATSFPQVILSAATFDSLLWYRIGQAIGAEARAIYNAGQATGMTFWAPNINIFRDPRWGRGQETAGEDPLVNSKYAVSYVRGVQGDSFQGGKLRGHLQASACCKHFTAYDLDNWKGVNRFIFDARVTSQDLADTYQPPFRSCVEQGRASGIMCAYNRVNGVPNCADFNLLTKTARRQWGFHGYITSDCGAVSLLHDDQGYAKSAEDAVADVLRAGMDVECGDYLTKYVKAAVTQKKLPISQVDRALHNLFSIRIRLGLFDGNPAKLSFGMIGPNEVCSKDHLYLALEAARNGIVLLKNSARLLPLPKTNPTISLAFIGPNANASPLTLLGNYAGPPCKVVTPLQAFQHYVKNTIYHPGCDGGVKCPSAQIDKAVEIATKADYVVLMMGLDQSQEREDRDRVHLDLPGKQQELIHSVAKASKRPVILVIFSGGPLDISLAKYDNKVGSIFWAGYPGEVGGIALAQIIFGDHNPGGRLPMTWYPKDFIRVPMTDMRMRADPTSGYPGRTYRFYTGPKVYEFGYGLSYSKYSHEFVSVTQNKLLLNQSSSYLIVENSETIRIKSVSELGAKVCQSMSVSVTVGVENEGSMAGKHSVLLFTRHAKQRNGNPIKQLVGFESVMLDAGERAQVEFEISPCEHLSRASEVGSKVIEEGSHLLIVGDEEYPIDVIF 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0574 777 PRINTS Glycosyl hydrolase family 3 signature 208 224 IPR001764 GO:0004553|GO:0005975
Prci15g0574 777 PRINTS Glycosyl hydrolase family 3 signature 114 133 IPR001764 GO:0004553|GO:0005975
Prci15g0574 777 PRINTS Glycosyl hydrolase family 3 signature 282 300 IPR001764 GO:0004553|GO:0005975
Prci15g0574 777 Pfam Glycosyl hydrolase family 3 N terminal domain 107 358 IPR001764 GO:0004553|GO:0005975
Prci15g0574 777 Pfam Fibronectin type III-like domain 701 768 IPR026891 -
Prci15g0574 777 Gene3D - 387 635 IPR036881 GO:0004553|GO:0005975
Prci15g0574 777 SUPERFAMILY (Trans)glycosidases 41 400 IPR017853 -
Prci15g0574 777 FunFam probable beta-D-xylosidase 2 387 635 - -
Prci15g0574 777 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 402 637 IPR036881 GO:0004553|GO:0005975
Prci15g0574 777 Gene3D Immunoglobulins 662 775 IPR013783 -
Prci15g0574 777 SMART Fn3_like_2 700 770 IPR026891 -
Prci15g0574 777 PANTHER SUGAR HYDROLASE-RELATED 25 773 IPR044993 GO:0009044|GO:0045493
Prci15g0574 777 Gene3D - 53 376 IPR036962 GO:0004553|GO:0005975
Prci15g0574 777 FunFam probable beta-D-xylosidase 7 53 374 - -
Prci15g0574 777 Pfam Glycosyl hydrolase family 3 C-terminal domain 402 634 IPR002772 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0574 Prci-Chr15 3715672 3720063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0574 27 775 Glycoside Hydrolase AT1G78060 65.027 0.0 1020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0574 - - aprc:113867121 1307.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0574 15 3715672 3720063 Prci15g0574 15 3715672 3720063 ECH