Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0550 ATGGAAAAGAATGAGTTAGTGGAGACAATCGCATTAAATTCTCAAGCTGTTGAAAAGCTGGAAGGAGATCTTTCCACTATCCACAATGAAAAGTCCAAACCACGAGAAGAGGTAAAAAATCAAAATATTGGCAGTGATGATCTCTTGTCAGACAATAGACAATATGATATATCTGACAAGACGAATGAGATGACAGATAAGCACGAGAGTAATGTCATGAAGACTGAAACTGAAGATGAACCCTTCAATATTGTTGGACTAAATTCCTTTGGTGATAATGTTGATGGCAGCAAAGGGTCTGAGTTTACCAGTCAAGAAGGAATTGCAGATGAGGTTTCTGGACAAAACGACTTGGCCAAAGGGATGAACGAGAGTGGGAACATGGAATCCACACCAATGAATCAGAAGACAGATGAAATTCCAAGTGAGGGCAATAATCTAGAGCCCGTGTTTGATGGAACAGAGGTTCCTGGCATGGAAGCTAGCAGAAGCACAGATAACTTTTCTCTAGATGTGGAGTCTGATTCGGACAGTCATGGTGTGGTTGAGAAGGCTGTGGCACTTAAGAATTTTGTTAGGGAGAAAAGTGCTGTAGCAGTCTCTACTGTGCTACGTCGCCTTTCCGGAAAAGGTGATGAAGGTCCCATGAGCAATTTTGATGATGAAAGTAAGAATGTTTCAGAATCCTCAAACGTGGATTATAAAGAAGTTACTGAGAAAAAATCTTGGAACCCCCTTAATTATATTAGGATGTCACTCGATGCTGATTTGGAAGGTAAAAATGAATGGAGGGAACCGATAACTGAAGGTCCACAATATCCCATAACCATGAAAGGAAGGATTATACTCTACACAAGACTAGGTTGCCAGGAATCTAAAAAAGTTAGGCTATTTTTGTATATGAAACGGCTTTGGTATGTTGAAATCAATATTGACATATACCCAAGTAGAAAACAGGAGCTTGAGAAGATTTCTGGATCTACTTCTGTTCCCAAGGTGTTTTTTAATGAAATACTTATTGGAGGTTTGAGTGAGCTAAAGGCCCTGGATGAATCTGGTAAGCTCGATGAGAAGATTGAATTTCTCATCACTAAAGCACCATCAATTGAAGCTCCATTACCGCCGCTTTCTGGAGAGGATGATGAGTCTAGTAGTGGAGCTCTTGATGAAATGGCTTTAATTGTCAGCAAATTGAAAGAATTCATTGTTGTAAAAGACCGATTTTACAAAATGCGAAGGTTCACTAAATGCTTTATTGGCTCAGAAGCTGTGGACTTCTTATCAGAAGATCAATACTTGGAAAGGCAGGAGGCTGTTGAGTTTGCACAGAATCTTGCTAGCAAATTCTTCTTCCAACATGTTCTTGATGAGAATCTATTCGAGGATGGTAACCACTTGTATCGTTTTTTGGATGATGACCCAATCGTGGCTTCTCAATGTCACAATATTCAGAGGGGCATAACCACTGTAAAGCCAAAGCTTATAGTAGAAATTGCATCAAGGCTGAGGTTTCTGTCTTGTGCAATATTTGAAGCCTATGTTTCTGAAGATGGCCATCATGTTAATTACATAAGTCTCCACAGAAGCGAGGAGTTTGCGAGGTATCTGAGAATAGTAGAGGAGCTCCAAAGAGTGGAAATATGGGATATGTCTAGAGAAGAGAACCTAGCTTTCTTCATCAATCTTTATAATATGATGGCCATTCATGCAATCTTAGAATGGGGTCATCCAGCTGGAGCACTGGAAAGAAGGAAATTGTTTGGAGACTTCAAATATGTGATTGGTGGGTCCACTTACTCACTTTCAGCCATTCAAAATGGCATTTTACGGGGAAACCAGCGGCCACCTTACAATCTTTTGAAGCCATTTGGTGCAAAAGATAAACGTTTGAGGGTGGCTCTTCCTTACCCTGAGCCTCTTGTTCATTTTGCTCTAGTATGTGGCACCAGATCTGGGCCTGCACTTAGATGCTATTCTCCTCGAGATATTGACAAAGAACTAATGGACGCTGCTCGCAATTTCTTGAGAAGTGGAGGACTTGCCATTGATTTGAATACGAAGACTGCATACGCTAGTAAGATCCTTAAGTGGTTTAGTATAGATTTTGGCAAGAACGATGTAGAGGTACTGAGGCATGTGTCAAATTACTTAGACCCAGCTGACGCAGCAGTATTGTTGGATCTGCTTGCCACTTCTGAATTGAAGCTAACAAGGTGCATACAGAAGAACTTCATGCAAAGAGGAGACTCTCAAACAACAGCTTATGCCCAATGGGGTGTGGAGAGGAGGAGAACTTGA 2298 0.4091 MEKNELVETIALNSQAVEKLEGDLSTIHNEKSKPREEVKNQNIGSDDLLSDNRQYDISDKTNEMTDKHESNVMKTETEDEPFNIVGLNSFGDNVDGSKGSEFTSQEGIADEVSGQNDLAKGMNESGNMESTPMNQKTDEIPSEGNNLEPVFDGTEVPGMEASRSTDNFSLDVESDSDSHGVVEKAVALKNFVREKSAVAVSTVLRRLSGKGDEGPMSNFDDESKNVSESSNVDYKEVTEKKSWNPLNYIRMSLDADLEGKNEWREPITEGPQYPITMKGRIILYTRLGCQESKKVRLFLYMKRLWYVEINIDIYPSRKQELEKISGSTSVPKVFFNEILIGGLSELKALDESGKLDEKIEFLITKAPSIEAPLPPLSGEDDESSSGALDEMALIVSKLKEFIVVKDRFYKMRRFTKCFIGSEAVDFLSEDQYLERQEAVEFAQNLASKFFFQHVLDENLFEDGNHLYRFLDDDPIVASQCHNIQRGITTVKPKLIVEIASRLRFLSCAIFEAYVSEDGHHVNYISLHRSEEFARYLRIVEELQRVEIWDMSREENLAFFINLYNMMAIHAILEWGHPAGALERRKLFGDFKYVIGGSTYSLSAIQNGILRGNQRPPYNLLKPFGAKDKRLRVALPYPEPLVHFALVCGTRSGPALRCYSPRDIDKELMDAARNFLRSGGLAIDLNTKTAYASKILKWFSIDFGKNDVEVLRHVSNYLDPADAAVLLDLLATSELKLTRCIQKNFMQRGDSQTTAYAQWGVERRRT 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0550 765 MobiDBLite consensus disorder prediction 209 232 - -
Prci15g0550 765 Gene3D Glutaredoxin 276 361 - -
Prci15g0550 765 Pfam Protein of unknown function, DUF547 549 675 IPR006869 -
Prci15g0550 765 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 8 736 - -
Prci15g0550 765 MobiDBLite consensus disorder prediction 125 144 - -
Prci15g0550 765 ProSiteProfiles DEP domain profile. 398 471 IPR000591 GO:0035556
Prci15g0550 765 CDD DEP 402 468 - -
Prci15g0550 765 SUPERFAMILY Thioredoxin-like 278 360 IPR036249 -
Prci15g0550 765 MobiDBLite consensus disorder prediction 125 142 - -
Prci15g0550 765 Gene3D - 390 521 IPR036388 -
Prci15g0550 765 MobiDBLite consensus disorder prediction 23 42 - -
Prci15g0550 765 MobiDBLite consensus disorder prediction 23 74 - -
Prci15g0550 765 MobiDBLite consensus disorder prediction 52 74 - -
Prci15g0550 765 Pfam Glutaredoxin 281 337 IPR002109 -
Prci15g0550 765 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 403 469 IPR000591 GO:0035556
Prci15g0550 765 SUPERFAMILY "Winged helix" DNA-binding domain 400 479 IPR036390 -
Prci15g0550 765 ProSiteProfiles Glutaredoxin domain profile. 269 366 - -
Prci15g0550 765 SMART DEP_3 398 471 IPR000591 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0550 Prci-Chr15 3580755 3588451 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0550 - - tpra:123896937 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0550 15 3580755 3588451 Prci15g0550 15 3580755 3588451 ECH