Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0519 ATGCGATCGCTACTTTTCCACTTCGTGCGGAACCCTTTGCCCGCGCCGTCCTTCTTCTATTCACCAAACCTAAGATTACCGACCACTGCCGGGCTCTGCAACCTCTCTCCATCAATGGCGGCTATGGATCCGGGGAGTAACTCAACTAGTTCGCTGGTTTTATGCGGGAAATCACTGGCCGAGAATGAAATTGCTAAAAAAATCAAGATGGATAATACTTTGAAGCTTCCTGACAGTAGTGAAATTTCGATTGCTCTTCAGTCTGAATTGGATAATGAACCTCTTAAAGAAGATTCCTTTGGAATTGATTTATTCATGAACTCGCTTTCCACTCACAAATTTGGCCGGTTTCTCGTTTGGTCCCCACTGTTGTCTTCAACGCACGACGTGGTTTCACACAACTTTTGTGAACTTCCCATTGGCACGGTTTGTGTTGCTGATGTTCAGACCAAGGGACGAGGTCGGTCAAAGAATGTGTGGGAGTCTCCGTTGGGCTGCCTCCTATTTTCTTTCACTCTACAAATGGAGGATGGACGGGTTGTTCCTTTACTACAGTATGTAGTTTCCCTGGCTATCACGGAGGCAATAAAGGATATCTGTGACAAAAATGGCTTACCCAGTGTTGATGTAAAAATTAAGTGGCCAAATGATCTCTACCTAAATGGTCTTAAAGTTGGAGGCATTTTATGCACCTCAACCTATAAATCTAAGAAGTTTAATGTTAGTGCAGGTATCGGCTTGAATGTCAACAATGAGAAGCCAACAACATGTTTAGATTCGGCTCTGAGAGAGTTGTCCATGAAAGGGTACCAATTTCGGAGAGAGGATGTTCTGGCAGCCTTCTTTAACAAATTTGAGAAATTTTATGACCTTTTTGTGAATCAAGGATTCCAAACCCTGGAGCAGCTATATTATAAGACATGGTTGCACAGTGGACAAAGAGTTATTGTGCAGGAAAAGAATGAGGATCAAATGATTGAACACGTGGTAACCATTCAGGGTTTAACATCCTCAGGCTACTTGTTGGCCATCGGCAATGATAATCAAATGTGTGAGCTCCATCCTGATGGCAATAGCTTTGATTTTTTCAAAGGACTGGTTAGAAGGAAACTTGAGTGA 1119 0.429 MRSLLFHFVRNPLPAPSFFYSPNLRLPTTAGLCNLSPSMAAMDPGSNSTSSLVLCGKSLAENEIAKKIKMDNTLKLPDSSEISIALQSELDNEPLKEDSFGIDLFMNSLSTHKFGRFLVWSPLLSSTHDVVSHNFCELPIGTVCVADVQTKGRGRSKNVWESPLGCLLFSFTLQMEDGRVVPLLQYVVSLAITEAIKDICDKNGLPSVDVKIKWPNDLYLNGLKVGGILCTSTYKSKKFNVSAGIGLNVNNEKPTTCLDSALRELSMKGYQFRREDVLAAFFNKFEKFYDLFVNQGFQTLEQLYYKTWLHSGQRVIVQEKNEDQMIEHVVTIQGLTSSGYLLAIGNDNQMCELHPDGNSFDFFKGLVRRKLE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0519 372 NCBIfam biotin--[acetyl-CoA-carboxylase] ligase 122 342 IPR004408 GO:0004077|GO:0036211
Prci15g0519 372 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 103 293 IPR004143 GO:0036211
Prci15g0519 372 PANTHER BIOTIN PROTEIN LIGASE 48 370 - -
Prci15g0519 372 Gene3D Bira Bifunctional Protein; Domain 2 106 308 IPR045864 -
Prci15g0519 372 CDD BPL 117 292 IPR004408 GO:0004077|GO:0036211
Prci15g0519 372 Pfam Biotin protein ligase C terminal domain 310 365 IPR003142 GO:0036211
Prci15g0519 372 SUPERFAMILY Class II aaRS and biotin synthetases 104 308 IPR045864 -
Prci15g0519 372 Pfam Biotin/lipoate A/B protein ligase family 122 248 IPR004143 GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0519 K01942 - pvy:116132147 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0519 15 3360467 3365726 Prci15g0519 15 3360467 3365726 ECH