Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0467 ATGGCGCAGAAGGAGAAGTTGGTGGTGAAGTGGCGGTGGTGGTGGCCTCTAGCACTAGTTTTGACGGCGGCTTGGGGCGGTGCCCAGGGAGGCAATGTCACCTACGATGGCAGGTCTTTAATCATCAACGGTGAACACAAAATCGTTTTCTCCGGTTCAATTCACTATCCTCGCAGCACTCCTGAGATGTGGCCTTCCTTAATTTCCAAAGCCAAGCAGGGAGGCATAGATGTCATTCAAACTTACGTATTTTGGAACCTTCATGAGCCTAAACAAGGCCAGTATGACTGCAGTGGAAGGCGTGATATAGTGAGGTTCATCAAGAAGATCCAAGCACAAGGTTTATATGTCACCCTCAGAATTGGACCTTTCATTGAGAGTGAATGGACTTATGGGGGTTTGCCCGTTTGGTTGCATGACATTCCGGGCATTGTTTTTAGATCAGATAATGAGCCATTCAAGTATCAAATGCAAAAGTTCACCGCCAAAATTGTAAACTTGATGAAATCCCACAATCTTTATGCTTCACAAGGAGGGCCTATCATACTGTCACAGATCGAGAACGAGTATGGCACGATTGAACCGGCTTTTCACGAGGGAGGACCACGCTATGTTCATTGGGCAGCACAAATGGTCGTGGGGCTTCACACTGGTGTGCCCTGGGTTATGTGCAAGCAAGATGATGCTCCTGATCCGGTGATCAACGCGTGCAATGGTATGGAATGTGGGAGAACATTCAAGGGACCTAACTCGCCTCATAAACCTTCAATCTGGACAGAGAACTGGACAAGTTTCTATCAAGCCTTTGGTAATGAACCGTACTTGAGATCAGCTGAAAATATTGCGTATAATGTTGCCTTGTTCGTTGCAAAGAAGGGAAGCTATGTCAACTACTACATGTACCACGGAGGAACCAATTTTGGAAGAACATCTGCTACTTTTATGATTACGGCTTATTATGATGAAGCCCCTCTAGATGAATATGGTTTAATTAGGCAGCCAAAATGGGGGCATCTCAGAGACCTACATGCTGCGATCAAGTCCTGCTCAAAAACTATACTTTCTTCTACCCAAGCTACCCTCAGCTTGGGGGGGCAACAAGAAGCCTATGTTTTCAGAGAGAGCAAAACAGAATGTGCTGCCTTTCTGGAAAATAAAGATAACAGAGAAGTCACCGTCCGATTTCATAGCATTCCATATAAACTACCTCCAAAATCAATTAGCATTCTCCCAGATTGCAGGAGTGTAGCCTTCAACACTGCCAAAGTAAATGCAAAATACAGTACCAGAACAATGAAACCTGTAGTACATTTTAAATCAGCTGAACAATGGGAAGTGTACAAAGAAGCCATTCCTAGCATCGTTCACACTACCTTAAGAGCAAACAGGCTATTAGATCAGATCAGCACGGCAAAAGATAAATCTGACTATTTGTGGTATATTTTCAGGTTTCGTCATTCAAATTCTCAATCGTTTCTCAGTGCATCTAGCCATGGACATATCTTGCATGCATTCGTCAATGGAGTTCTAGCAGGTTCTGCACATGGAATTCACAACAATGTATCTTTCACCATGAACCGCAATATCAAATTGAGAAAAGGAGTCAACCATATTTCCTTCCTCAGTGCAACAGTTGGATTGCCGGATTCTGGAGCACACCTAGAGCGCAAAGTTGCTGGATTGCGCAGTGTCAGAGTTGGTGATAGAGATTTTAATCATCATACCTGGGGATATCAGGTTGGGTTATTAGGAGAAAAGTTGCAAATCTATACAGTTACTGGATCAAGTAAAGTTCAGTGGAAAAGGCTCGGAAGGTCAACAAATCCACTGGGGTGGTATAAGACCACATTTGATGCACCACCAGGAAATAATCCGATAGCACTTGATCTTGGTTCTATGGGGAAGGGTGAAGTTTGGGTTAATGGGGAGAGTATTGGCCGTTATTGGGTATCATTCGTCACGCCGAAAGGGAATCCTTCACAGAGATGGTACCATATCCCTCGATCCCTCCTGAAACCTTCTGGAAACCTACTAGTTCTGTTTGAAGAAGAAACAGGAGACCCCCTTAGGATTTCTCTGGACACAGTCACATTGTCATGA 2100 0.4424 MAQKEKLVVKWRWWWPLALVLTAAWGGAQGGNVTYDGRSLIINGEHKIVFSGSIHYPRSTPEMWPSLISKAKQGGIDVIQTYVFWNLHEPKQGQYDCSGRRDIVRFIKKIQAQGLYVTLRIGPFIESEWTYGGLPVWLHDIPGIVFRSDNEPFKYQMQKFTAKIVNLMKSHNLYASQGGPIILSQIENEYGTIEPAFHEGGPRYVHWAAQMVVGLHTGVPWVMCKQDDAPDPVINACNGMECGRTFKGPNSPHKPSIWTENWTSFYQAFGNEPYLRSAENIAYNVALFVAKKGSYVNYYMYHGGTNFGRTSATFMITAYYDEAPLDEYGLIRQPKWGHLRDLHAAIKSCSKTILSSTQATLSLGGQQEAYVFRESKTECAAFLENKDNREVTVRFHSIPYKLPPKSISILPDCRSVAFNTAKVNAKYSTRTMKPVVHFKSAEQWEVYKEAIPSIVHTTLRANRLLDQISTAKDKSDYLWYIFRFRHSNSQSFLSASSHGHILHAFVNGVLAGSAHGIHNNVSFTMNRNIKLRKGVNHISFLSATVGLPDSGAHLERKVAGLRSVRVGDRDFNHHTWGYQVGLLGEKLQIYTVTGSSKVQWKRLGRSTNPLGWYKTTFDAPPGNNPIALDLGSMGKGEVWVNGESIGRYWVSFVTPKGNPSQRWYHIPRSLLKPSGNLLVLFEEETGDPLRISLDTVTLS 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0467 699 SUPERFAMILY (Trans)glycosidases 30 349 IPR017853 -
Prci15g0467 699 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 178 190 IPR019801 GO:0004553|GO:0005975
Prci15g0467 699 Gene3D - 584 697 - -
Prci15g0467 699 FunFam Beta-galactosidase 578 699 - -
Prci15g0467 699 SUPERFAMILY Galactose-binding domain-like 407 556 IPR008979 -
Prci15g0467 699 SUPERFAMILY Galactose-binding domain-like 574 697 IPR008979 -
Prci15g0467 699 PANTHER BETA-GALACTOSIDASE RELATED 23 698 IPR001944 GO:0004553|GO:0005975
Prci15g0467 699 PRINTS Glycosyl hydrolase family 35 signature 635 651 IPR001944 GO:0004553|GO:0005975
Prci15g0467 699 PRINTS Glycosyl hydrolase family 35 signature 43 60 IPR001944 GO:0004553|GO:0005975
Prci15g0467 699 PRINTS Glycosyl hydrolase family 35 signature 119 138 IPR001944 GO:0004553|GO:0005975
Prci15g0467 699 PRINTS Glycosyl hydrolase family 35 signature 294 309 IPR001944 GO:0004553|GO:0005975
Prci15g0467 699 PRINTS Glycosyl hydrolase family 35 signature 176 191 IPR001944 GO:0004553|GO:0005975
Prci15g0467 699 PRINTS Glycosyl hydrolase family 35 signature 257 272 IPR001944 GO:0004553|GO:0005975
Prci15g0467 699 PRINTS Glycosyl hydrolase family 35 signature 608 622 IPR001944 GO:0004553|GO:0005975
Prci15g0467 699 PRINTS Glycosyl hydrolase family 35 signature 313 329 IPR001944 GO:0004553|GO:0005975
Prci15g0467 699 PRINTS Glycosyl hydrolase family 35 signature 64 82 IPR001944 GO:0004553|GO:0005975
Prci15g0467 699 FunFam Beta-galactosidase 29 350 - -
Prci15g0467 699 FunFam Beta-galactosidase 299 425 - -
Prci15g0467 699 Pfam Beta-sandwich domain in beta galactosidase 354 423 IPR041392 -
Prci15g0467 699 Gene3D Glycosidases 28 350 - -
Prci15g0467 699 Pfam Glycosyl hydrolases family 35 39 345 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0467 Prci-Chr15 2953956 2960162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0467 21 698 Glycoside Hydrolase AT5G63800 60.320 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0467 - - pvu:PHAVU_009G127500g 1069.68