Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0410 ATGGATTCTTGCGGTAACATCTCAGATCCATCATGCGTTGGGAAGCAATCCCATGTTTCCAGGAATTTCGCGTGGCCGAAGGAGAGCGTGGTCGAAGCCCAAGGAGAGCTGGAAGCGCCACTGGTGGATCTTGACGGCTTCATCAGAGGCGACCAGGACGCCACCCGCCGAGCCGCCGAGCTAGTGAGTCGAGCTTGCCTGACCCACGGCTTCTTCCAGGTGATCAATCATGGAATTGATTCGCGTCTCGTCGAGGAGGCTTACCAACAGTTGGACGCTTTCTTCAAGCTCCCACTTCACAGGAAATCAAGCCTTCCCAAGACTGCCGGCTCCATGTGGGGCTATTCTGGCGCTCATGCTCATCGTTTTTCCCGCAACCTCCCTTGGAAGGAGACCCTCTCTTTCCCCTTCCACCACAGTAGTGACGTCTCTGAGCCTGTCGTCTCCACCTTCTTTACTTCTAACATTGGACAAGATTTTCAACATGCTGGGATGGTGTTTCAGAAGTACTGCGAGGGAATGAAGGAGTTAGGGTTGAAGCTGATGGAGCTTCTGGGAATAAGCTTAGGGGTGGAGCGGTGGCATTACAGGGAATTTTTTGAAGACGGAGAGTGTATAATGAGATGCAACTATTACCCGCCATGCCATGAGCCTGGTCTTGCCCTTGGGACGGGACCGCATTGCGACCCGACTTCCTTGACCATACTTCATCAAGACGATGTTGGAGGGCTCGATGTTTTCACAGATGACAAGTGGCAGAGGGTTCCTCCTCGTCCTCACGCTCTTGTGGTCAATATTGGCGATACCTTTTCGGCACTATCAAACGGGAGATACAAGAGCTGCGTGCACAGGGCAGTGGTGAAAAGGTACAAGGAGAGGAGGTCCATGGCATTCTTCGTGTGCCCCAAAGGAGACAAAGTGGTGAGACCCCCTCAGGATCTGGTGCTCAGGGATGGCGCCACCTTGTTCCCTCACTTCACGTGGTCCGACTTCCTTCTTTTCACTCAGTCCTTCTACAGAGCCGACCACTCCACTCTCCACCACTTCACCCGCTGGCTGCTCTCCTCCAAACCCTCCTCTGCTTAA 1086 0.5368 MDSCGNISDPSCVGKQSHVSRNFAWPKESVVEAQGELEAPLVDLDGFIRGDQDATRRAAELVSRACLTHGFFQVINHGIDSRLVEEAYQQLDAFFKLPLHRKSSLPKTAGSMWGYSGAHAHRFSRNLPWKETLSFPFHHSSDVSEPVVSTFFTSNIGQDFQHAGMVFQKYCEGMKELGLKLMELLGISLGVERWHYREFFEDGECIMRCNYYPPCHEPGLALGTGPHCDPTSLTILHQDDVGGLDVFTDDKWQRVPPRPHALVVNIGDTFSALSNGRYKSCVHRAVVKRYKERRSMAFFVCPKGDKVVRPPQDLVLRDGATLFPHFTWSDFLLFTQSFYRADHSTLHHFTRWLLSSKPSSA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0410 361 SUPERFAMILY Clavaminate synthase-like 16 341 - -
Prci15g0410 361 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 202 302 IPR005123 -
Prci15g0410 361 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 40 331 - -
Prci15g0410 361 Pfam 2OG-Fe(II) oxygenase superfamily 204 302 IPR044861 -
Prci15g0410 361 Gene3D - 12 334 IPR027443 -
Prci15g0410 361 PRINTS Isopenicillin N synthase signature 62 79 - -
Prci15g0410 361 PRINTS Isopenicillin N synthase signature 227 248 - -
Prci15g0410 361 PRINTS Isopenicillin N synthase signature 262 288 - -
Prci15g0410 361 Pfam non-haem dioxygenase in morphine synthesis N-terminal 40 140 IPR026992 -
Prci15g0410 361 FunFam Gibberellin 20 oxidase 2 11 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0410 Prci-Chr15 2653108 2657090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0410 14 299 Glycosyltransferase AT5G59530 30.303 5.91e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0410 K05282 - gmx:100801187 494.967