Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0399 ATGGTGAAGATAGTGAAGAAGAAGCCTGACTTAAATGTCAGGGAAAAGATACTGATTTTGATTGATATGTGGCAAGAAGCTTTTGGCGGTCCAAGTGGAAGATTCCCCCAGTTCTATGCAGCATATAATGAACTAAGGTCTGCTGGAGTTGAATTTCCGCCACGGGAAGAGAATAGGGCACCCCTGTTCACTCCTCCTCAAACCCAGCCGATTGTTTACCCTACTGCAGAATATGATGATGCTGCAATTCAAGCTTCTCTTCAGTCGGATGCTTCTGGCCTTAGCCTGCCAGAGATTCAAAGTGCTCAAGGACTAGCTGATGTATTGATGGAAATGCTCAGCGCTTTGGATCCAAAAAAGCCTGAGGGTGTGAAGCAAGAAGTAATTGTTGACCTTGTTGATCAGTGCCGCTCTTACCAAAAGCGGGTCATGCTTCTTGTGAATAATACTGCGGATGAGCAACTTTTGAGCCAGGGATTGGCACTGAACGACAGCCTGCAACGTGTACTTGGCCGACATGATGATATTCAAAATGGAACTCTTAATTCAGGTGCAACTGCGAGAGGAACAGAAACCTCTGTTCTTCCGCTTGTCAATGTAAACCATGAGGATGATGAGTCGGAAGATGACTTTGATCAGTTAGCTCACAGGTCAAGGGATACTCATGCACTGGGTCGTAAGCCAGCCAATGACAAGGCAGAAAGTGTGAGAATAAATCAAATTCTTCCCCCACCACCAGCATCAAGGAAGCCTGTAGTCTCTGATTCTGGCATGGTTGACTATCTTAGTGGTGACGCCTACAAAGTAGACAGCTCAGAAAGCCCCATTTCGGTTCCATCTCATTCTAGCCCTTGTCCTTCATCACCCCCTTCTCATGGCATGAGCACGTCGTCGCCAACTTTTACCAGACAAGCCGTGTATGATGAACCGTCTCCCCTTAGCAAATCAGATCACCTTCCTCCAGCTCCCTGGGACACCCAATCTTCTGGAGTACTTCCACCCCCACCATCAAAGTATAACCAGAGACAACAGTTTTTGAGCAGCAAGGCAGGTCATTCAAGTAGCGGATCCAATTCCTCTTACGATAGCTTGGTGGGACACGCGCAGAATTTGTCTTTGAATTCATCTACCCCAGCCAAACAAGAGAAGCCAGAAGATGCCCTTTTCAAAGACCTGGTTGACTTTGCTAAATCGAAGACTTCTTCGTCTTCAAAACCAAATAGGTCATATTGA 1233 0.4647 MVKIVKKKPDLNVREKILILIDMWQEAFGGPSGRFPQFYAAYNELRSAGVEFPPREENRAPLFTPPQTQPIVYPTAEYDDAAIQASLQSDASGLSLPEIQSAQGLADVLMEMLSALDPKKPEGVKQEVIVDLVDQCRSYQKRVMLLVNNTADEQLLSQGLALNDSLQRVLGRHDDIQNGTLNSGATARGTETSVLPLVNVNHEDDESEDDFDQLAHRSRDTHALGRKPANDKAESVRINQILPPPPASRKPVVSDSGMVDYLSGDAYKVDSSESPISVPSHSSPCPSSPPSHGMSTSSPTFTRQAVYDEPSPLSKSDHLPPAPWDTQSSGVLPPPPSKYNQRQQFLSSKAGHSSSGSNSSYDSLVGHAQNLSLNSSTPAKQEKPEDALFKDLVDFAKSKTSSSSKPNRSY 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0399 410 Pfam GAT domain 105 177 IPR004152 GO:0035091|GO:0043130
Prci15g0399 410 ProSiteProfiles VHS domain profile. 1 53 IPR002014 GO:0035091|GO:0043130
Prci15g0399 410 SUPERFAMILY ENTH/VHS domain 1 53 IPR008942 -
Prci15g0399 410 MobiDBLite consensus disorder prediction 269 364 - -
Prci15g0399 410 MobiDBLite consensus disorder prediction 219 256 - -
Prci15g0399 410 MobiDBLite consensus disorder prediction 331 364 - -
Prci15g0399 410 Gene3D - 1 63 IPR008942 -
Prci15g0399 410 PANTHER TOM1-LIKE PROTEIN 1 406 IPR044836 GO:0035091|GO:0043130|GO:0043328
Prci15g0399 410 MobiDBLite consensus disorder prediction 273 309 - -
Prci15g0399 410 ProSiteProfiles GAT domain profile. 90 178 IPR004152 GO:0035091|GO:0043130
Prci15g0399 410 SUPERFAMILY GAT-like domain 57 179 - -
Prci15g0399 410 CDD GAT_GGA-like_plant 98 176 - -
Prci15g0399 410 Gene3D - 87 185 IPR038425 -
Prci15g0399 410 MobiDBLite consensus disorder prediction 219 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0399 Prci-Chr15 2595319 2599495 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0399 - - pcin:129294710 743.421