Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0387 ATGGCGACAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAACAGAATCAATCCTCCAAGGGTCTCTGTGGATAATGCTAGTTGCCATGATTGTACACTGATCAAGGTTGATAGCGTTAACAAACCTGGAATTCTTCTGGAACTGGTGCAAATTCTAACAGACCTTGACTTTATAATCACCAAAGCTTACATATCTTCAGATGGTGGATGGTTTATGGATGTTTTTCATGTGACGGATCAGCAAGGAAAGAAGATTACCGACATCAAAACCATTGACTTCATAGAAAAGGCTCTAGGACCCAAGGGTCAGAGCACAGATGGGGCAAAGAGTTGGCCTGCCAAACGGATTGGGGTACACTCCATTGGTGATCACACAGCTATTGAGCTCATAGGCAGAGATCGCCCTGGTCTTTTGTCTGAGATCTCAGCTGTCCTTGCCAATCTCCAATTTAATGTGATTGCGGCTGAAGTTTGGACTCATAATAGACGCATAGCATGTGTTCTTTATGTCAATGATGCTGCCACCGGGGCTGTTGATAACCCAAACAAATTATCTCTTATGGAGGAGCAGCTCAAAAACATTTTACGTGGATGTGAGAATGATGAGAAAGTGGCTCGCACCAGTTTCTCTATGGGTTTCACCCATATGGATAGAAGACTCCACCAAATGTTGTTTGCTGATCGGGACTATGAATGTACTGGAGTAATGGCCGACGTGGATTATCCACCTTGTTTTAGGCCAAAAATATCAATAGAACGTTGTGAGGAAAAAGGGTATTCAGTGGTTAGTGTCAGCTGTAAGGATCGGGCAAAACTGATGTTTGACATTGTTTGCACTCTTACTGACATGCAATATGTTGTTTTCCATGCCACAATCTCATCGGATGGCCCTCATGCATCCCAGGAGTACTTCATTCGGCACATGGATGGATGTACGCTTGATACTGAAGCAGAGAAAGAGAGGGTTATTAAATGCATTGAAGCTGCTATTCAGAGAAGAGTAAGCGAGCTATCTACTTGTATTGTTGCAATGGGTGTGAGCCTTGAGCTGTGTGCAAAGGATAGAGTGGGGTTACTATCTGAAGTGACTAGGATTCTCCGAGAGAATGGCTTGACAGTTTGTAGGGCAGCTGTATCTACCATCGGAGAGCAAGCACTGAATGTGTTCTACGTGAGAGATGCTTCTGGAAATCCAGTGGACATGAAGATTGTTGAAGCACTTCGCAAAGAGATTGGGCAGACAATGATGGTCAAGGTGAAGAGAGTAGCAACCGATGCCGAGACTCCCGAGACCCGAGGATGGGCCAAAACAGGATTCTTCTTTGGGAACTTGCTGGAAAGATTCTTGTCTTGA 1365 0.444 MATVCWPYFDPEYENFSNRINPPRVSVDNASCHDCTLIKVDSVNKPGILLELVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDIKTIDFIEKALGPKGQSTDGAKSWPAKRIGVHSIGDHTAIELIGRDRPGLLSEISAVLANLQFNVIAAEVWTHNRRIACVLYVNDAATGAVDNPNKLSLMEEQLKNILRGCENDEKVARTSFSMGFTHMDRRLHQMLFADRDYECTGVMADVDYPPCFRPKISIERCEEKGYSVVSVSCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPHASQEYFIRHMDGCTLDTEAEKERVIKCIEAAIQRRVSELSTCIVAMGVSLELCAKDRVGLLSEVTRILRENGLTVCRAAVSTIGEQALNVFYVRDASGNPVDMKIVEALRKEIGQTMMVKVKRVATDAETPETRGWAKTGFFFGNLLERFLS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0387 454 CDD ACT_ACR_4 349 420 - -
Prci15g0387 454 ProSiteProfiles ACT domain profile. 351 428 IPR002912 -
Prci15g0387 454 Gene3D - 349 429 - -
Prci15g0387 454 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
Prci15g0387 454 Gene3D - 128 210 - -
Prci15g0387 454 SUPERFAMILY ACT-like 32 106 IPR045865 -
Prci15g0387 454 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 6 424 IPR040217 -
Prci15g0387 454 SUPERFAMILY ACT-like 351 416 IPR045865 -
Prci15g0387 454 CDD ACT_ACR_1 35 106 - -
Prci15g0387 454 CDD ACT_ACR_3 263 337 - -
Prci15g0387 454 ProSiteProfiles ACT domain profile. 37 116 IPR002912 -
Prci15g0387 454 SUPERFAMILY ACT-like 125 201 IPR045865 -
Prci15g0387 454 Pfam ACT domain 265 326 IPR002912 -
Prci15g0387 454 Pfam ACT domain 130 198 IPR002912 -
Prci15g0387 454 Pfam ACT domain 351 413 IPR002912 -
Prci15g0387 454 Pfam ACT domain 37 85 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0387 Prci-Chr15 2539185 2547236 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0387 - - gmx:100789173 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0387 15 2539185 2547236 Prci15g0387 15 2539185 2547236 ECH