Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0372 ATGGCTCTGGAGAACTGTTTACGAGTGAGCACAGTGGGTATGGCCAGACCTCAATGCATTCATCCATTTTCCTTGAGGCAAAAGCTTGCCCGCCCCAGTTTCAAAGGATCCCAATCATCAGTATCAAACCCCTCTCTTAACTTAACGACGAGTAATTACAGAAGATCCCGTTTTATTTGCAATGCCCGAGAAGCAATTAACGAAGTTCGGGCAGTGACGGATTCGACCTGGAATAACCTGGTGATAGCAAGTGAGACCCCAGTGCTGGTGGAGTTTTGGGCACCATGGTGCGGACCGTGCAGGATGATAGCTCCTGTGATTGATGAATTGGCTAAAGAGTATGCCGGCAAAATTGCATGCTACAAGCTCAACACCGATGACAGTCCAAACATACCCACACAATACGGAATCAGGAGCATACCAACAGTTCTCTTCTTCAAGAATGGTGAGAAAAAAGAAAGCGTAATTGGCGCGGTCCCCAAGTCCACCTTGTCCGCGACTCTGGAGAAATATCTAGATATCTGA 525 0.4743 MALENCLRVSTVGMARPQCIHPFSLRQKLARPSFKGSQSSVSNPSLNLTTSNYRRSRFICNAREAINEVRAVTDSTWNNLVIASETPVLVEFWAPWCGPCRMIAPVIDELAKEYAGKIACYKLNTDDSPNIPTQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLSATLEKYLDI 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0372 174 ProSiteProfiles Thioredoxin domain profile. 37 173 IPR013766 -
Prci15g0372 174 Pfam Thioredoxin 69 169 IPR013766 -
Prci15g0372 174 CDD TRX_family 81 169 - -
Prci15g0372 174 NCBIfam thioredoxin 73 171 IPR005746 GO:0015035
Prci15g0372 174 PRINTS Thioredoxin family signature 88 96 - -
Prci15g0372 174 PRINTS Thioredoxin family signature 96 105 - -
Prci15g0372 174 PRINTS Thioredoxin family signature 136 147 - -
Prci15g0372 174 SUPERFAMILY Thioredoxin-like 57 173 IPR036249 -
Prci15g0372 174 Gene3D Glutaredoxin 69 173 - -
Prci15g0372 174 ProSitePatterns Thioredoxin family active site. 89 107 IPR017937 -
Prci15g0372 174 PANTHER GEO12009P1 63 172 - -
Prci15g0372 174 FunFam Thioredoxin 63 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0372 Prci-Chr15 2480389 2481632 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0372 K03671 - gmx:100500292 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0372 15 2480389 2481632 Prci15g0372 15 2480389 2481632 ECH