Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0356 ATGGATCTGGTGAAAGCCTTGACCTTGAGAGACTCCCCAACATCATTCTCACATGTAGTTCCTGCTAGTAACTTCTACTTACTTCCCCCATCTCCCAGAAATTTTTCTTTCCAATTGTGGGCCAGCTCATTCCATCATATTTCGAGAAAGTCCCAAATTCTCTGCGCCAAGAAAAGAAAATCGGAGTCAGATTTAGTTCTCGAACCCGCACTTGTCGAAGAGATGCCAATGAACGATGAAGAGGACGTCCTTGATGATTTCGAATACGAGGACTCAGGGGATGACGGTGACAACTTCTACGACGAAGAGGAGTATGGAGATGGCGATGCTGAACTCTTTGTAGGTGATGGGGGCGGAGGCGGTGGAATTTCTCTTGCTGGAACATGGTGGGATAAGAAAGCACTGGCGATTGCTGAAGAGGTTATTAGCTCTTTCGATGGTGAACTGCAAATATATGCTTTCAAGACATTGGTCAATTCCACCATTCGTGTGCGCATAGAGAGGCTTTCCAACAAGTCTGGCTCGCCTAGCATGGAAGACATCGAAGCTTTTTCTACTGCCTATAGAGCAAAGTTAGATGAAGCAGAGCTTGCCAAATTTGTGCCTGAAGATATAAGTTTGGAGGTGTCTTCTCCTGGTGTTGAAAGGATAGTCCGGATTCCCAATGACCTGGATCGATTCAAGGAGCGACCAATGTATGTGAAATACGTGAGCAATGAGGATTTAGATGTCTCATCTGCAGAAAGTGAGGGTGTGTTCAACCTGATAGCCTTTGACCTGGAAACAAGGTGCTGCACCTGGGGTTTGGCAGACGTGAGAGCAAATAGAGAGAAAGCAGGGAAAGGAAGACCACTGAACAAGAAGCAAAGAGAGTGGCGTTTAAGTACCCCCTTTGATTCTTTGCGTTTAGTTAGGTTGTATTCTGAAATGTAA 933 0.4555 MDLVKALTLRDSPTSFSHVVPASNFYLLPPSPRNFSFQLWASSFHHISRKSQILCAKKRKSESDLVLEPALVEEMPMNDEEDVLDDFEYEDSGDDGDNFYDEEEYGDGDAELFVGDGGGGGGISLAGTWWDKKALAIAEEVISSFDGELQIYAFKTLVNSTIRVRIERLSNKSGSPSMEDIEAFSTAYRAKLDEAELAKFVPEDISLEVSSPGVERIVRIPNDLDRFKERPMYVKYVSNEDLDVSSAESEGVFNLIAFDLETRCCTWGLADVRANREKAGKGRPLNKKQREWRLSTPFDSLRLVRLYSEM 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0356 310 Hamap Ribosome maturation factor RimP [rimP]. 132 310 IPR003728 GO:0042274
Prci15g0356 310 SUPERFAMILY YhbC-like, N-terminal domain 154 215 IPR035956 -
Prci15g0356 310 Pfam RimP N-terminal domain 152 215 IPR028989 -
Prci15g0356 310 PANTHER OSJNBA0006B20.18 PROTEIN 49 310 - -
Prci15g0356 310 Gene3D - 131 212 IPR035956 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0356 Prci-Chr15 2365366 2368922 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0356 - - mesc:110607582 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0356 15 2365366 2368922 Prci15g0356 15 2365366 2368922 ECH