Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0355 ATGGTTCTGATATCGGCGGTACGGGATTATATCAGCCGGATGTTGCAAGACATCTCTGGCATGAAGGTTCTCATATTAGATTCCCAGACGGTAAGTATTGTCAGTGTTGTCTATTCACAGTCAGAGCTTCTTCAGAAAGAAGTCTTCTTGGTAGAGTTAGTGGATTCCATTTCCAAGTCGAAGGAATCAATGTCACATCTCAAGGCTGTTTACTTCCTTCGACCAACTTCAGAGAACATCCAGCATCTACGCCGCCAAATAGCCAATCCTAGATTTGGAGAATATCATCTTTTTTTCTCCAATATGTTGAAGGACACTCAGATTCACATACTCGCTGATTCAGATGAAGAGGAAGTTGTCCAGCAAGTTCAGGAGTTTTATGCAGACTTTGTTGCCCTTGATCCTTACCATTTTACCTTAAATATGCCTTCAAATTACATTTATATGCTCCCAGCGGTGGTGGATCCTTCAACATTGCAGCGCTTCTGTGATCGGGCTGTTGACAGTATAGCAGCTGTTTTTTTGGCTTTAAAACGAAGACCCATTATTAGATACCAAAGGACATCTGACATTGCAAAAAGGATAGCACAGGAAGCAGCTAAAATGATGTACCAACAGGAAAGTGGCCTTTTTGATTTTAGGCGAACCGAAGTTTCTCCATTATTATTGGTAATTGACAGGAGGGATGATCCTGTAACCCCATTGTTAAATCAATGGACCTATCAGGCAATGGTTCATGAGCTTATAGGAATCCAAGATAACAAAGTAGATTTAAAAGCCCTTGGTAAATTTCCAAAGGAGCAGGAGGAAGTTGTGCTGTCATCAGAGCAAGATTCTTTCTTCAAAAGTAACATGTATGAGAATTTTGGAGATATAGGCATGAATATCAAGCGATTGGTAGATGAATTTCAGCAAGTGGCAAAGAGTAACCAGAACATCCAGACAATAGAGGACATGGCCAAATTTGTTGACAATTACCCTGAGTACAGAAAAATGCATGGAAATGTGTCAAAGCATGTAGCCTTGGTAACAGAAATGAGCAAGATTGTTCAAGAGAGAAAGCTTATGTTAGTTTCAGAAGTAGAACAGGAGTTGGCTTGTAATGGAGGGCAAGGGGCTGCTTTTGAGGCAGTGACAAATCTATTAAACAGTGAAAGCATATCAGATGAGGACCGGCTACGTTTAGTCATGTTGTATGCTTTGCGATATGAGAAGGATAGCCCTGTTCAATTGATGCAGCTTTTCAACAAACTGGCTTCCCGATCAGCCAAGTACAAGCCTGGGATTGTCCAGTTTCTTTTGAAGCAAGCAGGTGTTGACAAGAGAACGGGTGACCTTTATGGAAGTAGAGATCTACTGAATATTGCTCGTAACATGGCCCGTGGATTGAAGGGTGTGGAGAATGTATACACTCAACATCAGCCACTTCTGTTCCAGACCATGGAAAGTATTGTGAAAGGACGATTGAGAGATGTGGACTACCCAATTGTTGGAAATCACTTTCAGCAGGGAAGGCCGCAGGAAGTTATCATCTTCATTGTTGGTGGGACGACTTATGAGGAGTCACGATGTGTTGCTATACAAAATACCAGTAATATTGGGGTTCGTTTTATACTTTGCGGTACTACAGTTCTTAATTCTAAGGGGTTTCTTAGGGACTTGGAAGAAGCTCAGAGGGTAGCTCGTTCTAGCTCCTCTGTCGTTTGA 1707 0.4177 MVLISAVRDYISRMLQDISGMKVLILDSQTVSIVSVVYSQSELLQKEVFLVELVDSISKSKESMSHLKAVYFLRPTSENIQHLRRQIANPRFGEYHLFFSNMLKDTQIHILADSDEEEVVQQVQEFYADFVALDPYHFTLNMPSNYIYMLPAVVDPSTLQRFCDRAVDSIAAVFLALKRRPIIRYQRTSDIAKRIAQEAAKMMYQQESGLFDFRRTEVSPLLLVIDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDLKALGKFPKEQEEVVLSSEQDSFFKSNMYENFGDIGMNIKRLVDEFQQVAKSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVALVTEMSKIVQERKLMLVSEVEQELACNGGQGAAFEAVTNLLNSESISDEDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKPGIVQFLLKQAGVDKRTGDLYGSRDLLNIARNMARGLKGVENVYTQHQPLLFQTMESIVKGRLRDVDYPIVGNHFQQGRPQEVIIFIVGGTTYEESRCVAIQNTSNIGVRFILCGTTVLNSKGFLRDLEEAQRVARSSSSVV 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0355 568 Gene3D - 138 555 IPR027482 -
Prci15g0355 568 Pfam Sec1 family 22 553 IPR001619 GO:0016192
Prci15g0355 568 Gene3D - 4 128 IPR043154 -
Prci15g0355 568 FunFam Vacuolar sorting protein 3 128 - -
Prci15g0355 568 PIRSF VPS45_Sec1 1 565 IPR001619 GO:0016192
Prci15g0355 568 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 238 351 IPR043127 -
Prci15g0355 568 Gene3D - 353 474 - -
Prci15g0355 568 SUPERFAMILY Sec1/munc18-like (SM) proteins 3 556 IPR036045 -
Prci15g0355 568 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 7 554 IPR001619 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0355 Prci-Chr15 2347148 2358550 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0355 K12479 - tcc:18592542 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0355 15 2347148 2358550 Prci15g0355 15 2347148 2358550 ECH