Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0350 ATGGAGCAGAAGTCAGAGGTAAGGTGTGCCATTGAGGAGCTGTCGATGATTGCTGTGGCAAAACATGGAGATAATGACGACACGGCCTTCGTCTCCACCGAGCCTTTTTTATCTGTGTGTAACCTAGTTCTACAAGTTCTGGATAAGATAGGGCCGACCATGGCTGTTCTCAGACAAGACATTTCTCAAAACATCGAGAGACTGGAAGTGGTGCATAAATCAAATCCCTCCATGAACTCAAACTTGGTTGAGATATTGAAAACAGAGGCAAGCATAGGCAACGCGAAGAAGGGACCCAGCTGCAGTAAAGCCTTTGTTTGGCTCACTAGATCTCTGGATTTTGCGTTGGCGTTGTTGCAGAGCGTAGCAGAAGATGGTGGGAAGAATATGGAGGATGTAGTGGAAGAGTGTTATAATAACACTTTGAAACCATGGCATGGATGGATTTCATCTGCTGCTTTCAGAGTGGCTCTAAAACTGGTGCCAGATAGCCAAACTTTTGTAGATGTGCTCAAGGCAAAAGATGAAAACTATGAAACCCTAAAGGAGGAAATGCAGGCATTGGTTTCTTTACTAGGGCCCTTTCTCCACGACGTTCACTGCATTTTAGAAGTTTATAACTTGGATAAGCTCAAGTCCACTTGA 645 0.445 MEQKSEVRCAIEELSMIAVAKHGDNDDTAFVSTEPFLSVCNLVLQVLDKIGPTMAVLRQDISQNIERLEVVHKSNPSMNSNLVEILKTEASIGNAKKGPSCSKAFVWLTRSLDFALALLQSVAEDGGKNMEDVVEECYNNTLKPWHGWISSAAFRVALKLVPDSQTFVDVLKAKDENYETLKEEMQALVSLLGPFLHDVHCILEVYNLDKLKST 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0350 214 Pfam Glycolipid transfer protein (GLTP) 31 171 IPR014830 GO:0005737|GO:0120009|GO:0120013
Prci15g0350 214 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 25 202 IPR014830 GO:0005737|GO:0120009|GO:0120013
Prci15g0350 214 SUPERFAMILY Glycolipid transfer protein, GLTP 30 211 IPR036497 -
Prci15g0350 214 Gene3D Glycolipid transfer protein 2 210 IPR036497 -
Prci15g0350 214 Coils Coil 171 191 - -
Prci15g0350 214 FunFam Glycolipid transfer protein 2 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0350 Prci-Chr15 2317674 2319517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0350 6 196 Acyl Lipid Metabolism Gene Families AT2G34690 21.875 2.68e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0350 - - gmx:100806166 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0350 15 2317674 2319517 Prci15g0350 15 2317674 2319517 ECH