Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0335 ATGGTGGATTCAGAGCGAATCCAAAATCAATGGATGCCTTCCGGGCAAACCTCAGTGGCTGGAATGGATGGGCAAGGTTCCTTCTTGTTGGGATGCACCAGCGCGGGTGTTGGTCGAGATGGCGAGGAAAGCTCTTCTCTTATGAAACGAACATCAGATGATGGTAAACTGGGAGTCGGAGAACGAGCTTTCTCTGCCGCGGGCGCCGCCTTTCTCTCCGCAATCATTGTTAATCCTCTTGATGTTGCTAAGACAAGGTTGCAGGCACAGGCTGCTGGGGTCAATTATTCTCATCCTCTTGGTAACATGACCTATCGCATGGCTCATTTTGGACCAAATATGTTGTTTGCAGATTTAAGATGTTCTCCATCATGTACGCGGGCAGGAATCCATGGAACTGTATCAATTTGTCCTCCCGAGTGTTTTCGGTACAAAGGAACACTGGATGTTCTCTACAAAATTGTACAACAGGAAGGATTTGCCAGGCTGTGGAGGGGAACAAATGCAGGCCTAGCACTTGCTGTACCAACTGTAGGAATTTACCTTCCTTGCTATGACATATTCCGCAATTGGTTGGAGGAATTTGCAGCAAAAAACGTTCCACCCACAATTCCGTATGTACCCTTAGTGGCAGGCTCATTGGCACGCTCTCTAGCTTGTGCAACTTGTTATCCTATTGAGCTTGCTAGAACGCGCATGCAGGCTTTTAAAGAGATTCAAATTGTTGGAAAGCCTCCTGGAGTGTTCCAGACTCTCTTGGGTGTTGTCTCACAAGTAAAGAGCACAACTACTCTCCAGAACAGCTTGCAAGGTTATCGTGTCTTATGGACTGGCATGGGTTCTCAGCTTGCTCGTGACGTTCCCTTCTCTGCCATTTGCTGGTCAACACTTGAACCAATGAGAAGAAAACTTCTTAATCTCGTTGGAGGTGATGAAGCCAATGTAATGGTTGTCCTTGGTGCAAATTTTTCAGCTGGTTTTGTTGCAGGAAGCCTTGCTGCTGGTGCTACATGTCCGTTAGATGTTGCTAAAACTCGAAGGCAGATTGAGAGGGACCCAGCCAGGGCTTTGAAAATGACTACAAGGCAGACACTTATGGAGGTTTGGAGAGGAGGAGGCTTAAAGGGACTCTTTACAGGTGTTGGTCCACGAATTGGACGAGCGGGGCCCTCCGTTGGAATTGTGGTTTCGTTTTATGAAGTTGTGAAGCATGTTCTACACAACAACTACGCAACATCTTGA 1242 0.4726 MVDSERIQNQWMPSGQTSVAGMDGQGSFLLGCTSAGVGRDGEESSSLMKRTSDDGKLGVGERAFSAAGAAFLSAIIVNPLDVAKTRLQAQAAGVNYSHPLGNMTYRMAHFGPNMLFADLRCSPSCTRAGIHGTVSICPPECFRYKGTLDVLYKIVQQEGFARLWRGTNAGLALAVPTVGIYLPCYDIFRNWLEEFAAKNVPPTIPYVPLVAGSLARSLACATCYPIELARTRMQAFKEIQIVGKPPGVFQTLLGVVSQVKSTTTLQNSLQGYRVLWTGMGSQLARDVPFSAICWSTLEPMRRKLLNLVGGDEANVMVVLGANFSAGFVAGSLAAGATCPLDVAKTRRQIERDPARALKMTTRQTLMEVWRGGGLKGLFTGVGPRIGRAGPSVGIVVSFYEVVKHVLHNNYATS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0335 413 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 303 IPR018108 -
Prci15g0335 413 SUPERFAMILY Mitochondrial carrier 64 401 IPR023395 -
Prci15g0335 413 ProSiteProfiles Solute carrier (Solcar) repeat profile. 57 191 IPR018108 -
Prci15g0335 413 Pfam Mitochondrial carrier protein 208 305 IPR018108 -
Prci15g0335 413 Pfam Mitochondrial carrier protein 321 409 IPR018108 -
Prci15g0335 413 Pfam Mitochondrial carrier protein 57 193 IPR018108 -
Prci15g0335 413 Gene3D Mitochondrial carrier domain 41 137 IPR023395 -
Prci15g0335 413 ProSiteProfiles Solute carrier (Solcar) repeat profile. 317 405 IPR018108 -
Prci15g0335 413 Gene3D Mitochondrial carrier domain 138 412 IPR023395 -
Prci15g0335 413 PANTHER FI19922P1-RELATED 49 409 IPR045315 GO:1990542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0335 Prci-Chr15 2203864 2211381 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0335 153 403 Organic Solute Cotransporters AT3G55640 27.519 1.24e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0335 K15119 - gmx:100810960 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0335 15 2203864 2211381 Prci15g0335 15 2203864 2211381 ECH