Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0299 ATGAGGAACCCACTGTTCTTGCTGCTGAGACACCTTGTGAGTATGCATCATCAAACTGTCTCTGTGAGTGAAGTGGAGGCGCTACATGAGCTCTATAAGAAGTTGAGCAACTCCATTATTGAAGATGGTCTGATTCACAAGGAAGAATTCCAGCTGGCACTCTTCAGGAATAGAAACAAGAGAAATCTGTTTGCAGACAGGGTTTTTGACTTATTTGATGTCAAGCGCAACGGGGTTATTGAATTTGGGGAATTTGTTCGATCATTGGGTGTTTTTCACCCAAATGCACCTATGGAAGACAAGATTACTTTTGCTTTTAGGTTGTATGATCTGAGACAGACAGGATATATTGAACGAGAGGAGCTGAAGGAGATGGTCTTGGCGCTTCTTCACGAGTCAGATCTTGTACTTTCAGATGATATCATCGAAACCATTGTGGATAAGACATTTAGTGATGCTGATACAGAAGGTGATGGAAGGATTGATCAAGAGGAGTGGAAGGCATTCGTGTCAAAACATCCATCACTGATGAAGAACATGACCCTTCCCTACTTAAAGGATATAACCTTGGCATTTCCAAGTTTTGTGGTAAGAACAGAAGTTGAAGACTCAGAGGTCTGA 621 0.4187 MRNPLFLLLRHLVSMHHQTVSVSEVEALHELYKKLSNSIIEDGLIHKEEFQLALFRNRNKRNLFADRVFDLFDVKRNGVIEFGEFVRSLGVFHPNAPMEDKITFAFRLYDLRQTGYIEREELKEMVLALLHESDLVLSDDIIETIVDKTFSDADTEGDGRIDQEEWKAFVSKHPSLMKNMTLPYLKDITLAFPSFVVRTEVEDSEV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0299 206 FunFam calcineurin B-like protein 3 11 203 - -
Prci15g0299 206 Gene3D - 15 204 - -
Prci15g0299 206 SMART efh_1 145 173 IPR002048 GO:0005509
Prci15g0299 206 SMART efh_1 101 129 IPR002048 GO:0005509
Prci15g0299 206 SMART efh_1 64 92 IPR002048 GO:0005509
Prci15g0299 206 CDD EFh 101 171 IPR002048 GO:0005509
Prci15g0299 206 PRINTS Recoverin family signature 68 89 - -
Prci15g0299 206 PRINTS Recoverin family signature 161 181 - -
Prci15g0299 206 PRINTS Recoverin family signature 115 133 - -
Prci15g0299 206 SUPERFAMILY EF-hand 17 194 IPR011992 -
Prci15g0299 206 ProSiteProfiles EF-hand calcium-binding domain profile. 97 132 IPR002048 GO:0005509
Prci15g0299 206 ProSiteProfiles EF-hand calcium-binding domain profile. 60 95 IPR002048 GO:0005509
Prci15g0299 206 ProSiteProfiles EF-hand calcium-binding domain profile. 141 176 IPR002048 GO:0005509
Prci15g0299 206 Pfam EF hand 66 87 IPR002048 GO:0005509
Prci15g0299 206 Pfam EF-hand domain pair 100 169 IPR002048 GO:0005509
Prci15g0299 206 PANTHER CALCINEURIN B 18 204 IPR045198 GO:0005509|GO:0019722|GO:0019900
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0299 Prci-Chr15 1944356 1946837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0299 15 206 EF-hand Containing Proteins AT5G24270 73.958 2.79e-103 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0299 K06268 - gmx:100811649 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0299 15 1944356 1946837 Prci15g0299 15 1944356 1946837 ECH