Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0227 ATGTCTGAAATCACAATAAAATCTCCAAAACACTGTGCCCAGTACAAGCAATGCTTCAAGATTGAAAGAAACTACAAGAAGTTCTCCTTGGCTCTCTCTATATTCATCACCGCAATTCTTCTACTGTCGCTTGCGATATGGGTCATCCTCCGCCCTGCCAAGCCTCAATTCTCTATCCAACAAGTTGATATCTATCAGCTCAGTCTCTCAGGATCCCGCATAAACTCTTCCATTCAGGTCACACTGCTCTCAAAGAACCCAAACCAGAAAGTCGCCATTTACTACGACGACTTCCAAGTATACGCCACCTACAAGGGCCAGCAGATAACTTCATATACCTCTCTGCCACCGCTCTACCAGGACCACGAAGAGAGCAATCTCTTAACAGCCCCTCTGGTAGGAAATGAAGTCCCTGTGGCTCCCTCTCTTGGCTATGAAATGGGTCGTGATCAAACTGTTGGAAGACTGGTTCTGAATCTAAGAGTGAGTGGAAGGCTCCGGTGGAAAGTGGCGACGTGGGTCACTGGGCATTATGGGTTCGATGTTAAATGTATTTCAGTTATGGCGTTCGAACCCTCCATGCCTTCTGCTCCTCTCACTTCAAACCAGGGTGCTCAATGTTCTACCACTGTTTTAAACTGA 642 0.4673 MSEITIKSPKHCAQYKQCFKIERNYKKFSLALSIFITAILLLSLAIWVILRPAKPQFSIQQVDIYQLSLSGSRINSSIQVTLLSKNPNQKVAIYYDDFQVYATYKGQQITSYTSLPPLYQDHEESNLLTAPLVGNEVPVAPSLGYEMGRDQTVGRLVLNLRVSGRLRWKVATWVTGHYGFDVKCISVMAFEPSMPSAPLTSNQGAQCSTTVLN 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0227 213 PANTHER OS05G0367900 PROTEIN 27 198 IPR044839 GO:0098542
Prci15g0227 213 Pfam Late embryogenesis abundant protein 81 184 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0227 Prci-Chr15 1536873 1537862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0227 7 184 EF-hand Containing Proteins AT5G21130 21.978 1.24e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0227 - - gmx:100783857 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0227 15 1536873 1537862 Prci15g0227 15 1536873 1537862 ECH