Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0218 ATGGGTGAGGAAGCTAAACAGGAACAACCGAAGGCAGAGGAGAAGAAAGAAGAGAAAGCAGAGGAAAAGCCAGCGGAGGAGAAGAAAGAAGAGAAAGCGGAGGAGAAGAAGGAAGAGCCTAAACCGCCATCGCCATGCGTGCTGTCTGTGGACTTACATTGCGTGGGATGTGCCAAGAAAATTGAGAGATCTATTATGAAAATGCGAGGAGTTGAGGGGGTGGTCATTGATATGGCTAAAAATGAAGTAACCATAAAGGGGATAGTGGAACCCCAAGCAATCTGTGATAAAATTACCAAGAGAACAAGGAGAAGAGCCAAAGTTATTTCTCCATTGCCCGCAGCAGAAGGAGTACCTGTACCACGAGTCGTTACTTCTCAGGTTAGTGGACCAGTGACCGTGGAACTTAATGTAAACATGCACTGTGAGGCCTGTGCCGAGCAACTCAAGAAGAAAATTCTCAAAATGAGAGGAGTGCAAACAGCAGCGACAGAATCAAGCACGGGGAAGGTTACTGTGACAGGGACCATGGACGCGAACAAGCTGGTGGAATATGTGTATAGACGCACCAAAAAGCAAGCCAAAATAGTTCCACAACCAGAGCCTGAACCAGAGAAGAAGGAAGAACCTAAAGAAGCTGAGAAACCAGCAGAAGAGGCAAAGCCTGAGGAGAAAAAGGAAGAGAGCACAGAGAAGAAAGAAGAGGAGAAACCTGCAGAGGAGCCCAATAAGGAAGAAGAGGGAAACAAGGAAGGAGGTGAAGACAAGAGTGAGAATAAAGAAGAAAAAGGTGGTGAAGAAAGCAAGGAAGAGGCTAACAATGAAGGAGGAGATCACAGTGGGGTGGTTGTGATTGACGATGAAGGGATCAAGAGGATGATGTACTATTACCAGCAGCCACTCTGTGTGATTGAACGAATCCCACCTCCTCAGCTCTTCAGCGATGAAAACCCAAATGCATGCTGCATTTCATGA 975 0.4656 MGEEAKQEQPKAEEKKEEKAEEKPAEEKKEEKAEEKKEEPKPPSPCVLSVDLHCVGCAKKIERSIMKMRGVEGVVIDMAKNEVTIKGIVEPQAICDKITKRTRRRAKVISPLPAAEGVPVPRVVTSQVSGPVTVELNVNMHCEACAEQLKKKILKMRGVQTAATESSTGKVTVTGTMDANKLVEYVYRRTKKQAKIVPQPEPEPEKKEEPKEAEKPAEEAKPEEKKEESTEKKEEEKPAEEPNKEEEGNKEGGEDKSENKEEKGGEESKEEANNEGGDHSGVVVIDDEGIKRMMYYYQQPLCVIERIPPPQLFSDENPNACCIS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0218 324 MobiDBLite consensus disorder prediction 1 42 - -
Prci15g0218 324 SUPERFAMILY HMA, heavy metal-associated domain 128 192 IPR036163 GO:0046872
Prci15g0218 324 Gene3D - 130 196 - -
Prci15g0218 324 Gene3D - 44 106 - -
Prci15g0218 324 CDD HMA 135 195 IPR006121 GO:0046872
Prci15g0218 324 MobiDBLite consensus disorder prediction 1 44 - -
Prci15g0218 324 Coils Coil 243 263 - -
Prci15g0218 324 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 1 324 IPR044258 GO:0046872
Prci15g0218 324 ProSiteProfiles Heavy-metal-associated domain profile. 131 195 IPR006121 GO:0046872
Prci15g0218 324 Coils Coil 2 36 - -
Prci15g0218 324 SUPERFAMILY HMA, heavy metal-associated domain 48 101 IPR036163 GO:0046872
Prci15g0218 324 MobiDBLite consensus disorder prediction 193 282 - -
Prci15g0218 324 Pfam Heavy-metal-associated domain 137 184 IPR006121 GO:0046872
Prci15g0218 324 Pfam Heavy-metal-associated domain 48 97 IPR006121 GO:0046872
Prci15g0218 324 ProSiteProfiles Heavy-metal-associated domain profile. 43 106 IPR006121 GO:0046872
Prci15g0218 324 CDD HMA 47 100 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0218 Prci-Chr15 1483655 1485923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0218 - - tss:122664059 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1636 2 12198266 12200701 Prci15g0218 15 1483655 1485923 CCT
Prci15g0218 15 1483655 1485923 Prci15g0218 15 1483655 1485923 ECH