Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2168 ATGGATGCACACGCTCCTCTGCTCAAAACCTCAGACGCTCCGCCGCCTTCCCTGGCGATGGTGGCCGAGAACGGCGACTACGCTCCAGTTGAGGGGTTTAGGGCCGCCAGGGAGGTGTTCTGGACAGAATCGGTCAAGTTGTGGCAGATTGCCGTGCCGATCATTTTCAACATTGTGTGCCAATTCGCCGTCAACTCCTTCACCAACATTTTCGTCGGCCATCTTGGCGAAATTGAGCTCTCTGCGGTTTCTCTGTCTCTTTCTGTTATCGGAACTTTCTCTTTTGGCTTCATGCTTGGCATGGGAAGTGCATTGGAGACACTTTGTGGTCAAGCTTTTGGTGCTGGACAAATTTACTTGCTTGGTGTTTACATGCAACGCTCATGGATAATCCTATGGGTCACCTGCATTTTACTCTTGCCAATTTACATCTTTTCAGCTCCAATATTGGAATTTCTAGGCCAACAGAAAGAGATAGCTGATCTTTCTGCAAAGTTCACTATATTGGTAATTCCTCAGTTTTTCTCACTAGCCATCAATTTTCCAACCCAAAAGTTTCTTCAAGCTCAAAGCAAGGTTAATGTGATTGCCTGGATTGGTTTTGTGGCTCTACTTCTGCGCATTGGGTTGTTATGGATCTTAGTATATGTATTCAACTGGGGCTTAACTGGTGCAGCTGTGGCATTTGACGTCACAAGTTGGGGGATTTCATTGGCTCAAGTTGTTTATGTTGTAGTTTGGTGCAAGGAGGGGTGGCATGGATTCTCCTGGACAGCATTTAAGGATATATGGGCTTTCGTTAGGCTATCACTTGAATCAGCTGTAATGCTTTGCCTTGAGGTTTGGTATATGATGAGCCTTATTGTTCTTACTGGCCACCTTGATAACGCAGTCATCGCTGTAGATTCTCTCTCAATTTGCATGAATTACAATGGATGGGAAGCAATGCTGTTTATTGGAATAAACGCAGCAATAAGTGTCAGAGTTTCCAATGAACTTGGACTGGGACATCCAAGAGCTGCAAAATACTCTGTTTACGTGACAGTATTCCAATCTCTCTTGATTGGCATATTTTTTATGGTTGTTATTTTGGTAACTAGAGACTATTTTGCTATAATTTTCACGAGCAGCAAAATTTTGCATGCGGCAGTCTCCCGCCTAGCTGACCTCCTTGCTGTGACAGTACTTCTTAACAGTGTTCAACCAGTGATTTCAGGTGTTGCCGTTGGAGGTGGATGGCAGGCACTGGTGGCTTACATTAATGTGGGTTGTTATTACATTTTTGGGCTTCCCCTGGGATTCTATCTTGGTTATGAAGCAAAGTTAGGGGTCAAGGGACTTTGGGGAGGAATGATATGTGGAACTGCTCTACAGACATTGATGCTCTTGTTTGTACTTTATAGAACCAATTGGAACAAGGAGCTCCTAATGTTAATTCTGCTACAAATACACTGTAGTTGA 1461 0.4408 MDAHAPLLKTSDAPPPSLAMVAENGDYAPVEGFRAAREVFWTESVKLWQIAVPIIFNIVCQFAVNSFTNIFVGHLGEIELSAVSLSLSVIGTFSFGFMLGMGSALETLCGQAFGAGQIYLLGVYMQRSWIILWVTCILLLPIYIFSAPILEFLGQQKEIADLSAKFTILVIPQFFSLAINFPTQKFLQAQSKVNVIAWIGFVALLLRIGLLWILVYVFNWGLTGAAVAFDVTSWGISLAQVVYVVVWCKEGWHGFSWTAFKDIWAFVRLSLESAVMLCLEVWYMMSLIVLTGHLDNAVIAVDSLSICMNYNGWEAMLFIGINAAISVRVSNELGLGHPRAAKYSVYVTVFQSLLIGIFFMVVILVTRDYFAIIFTSSKILHAAVSRLADLLAVTVLLNSVQPVISGVAVGGGWQALVAYINVGCYYIFGLPLGFYLGYEAKLGVKGLWGGMICGTALQTLMLLFVLYRTNWNKELLMLILLQIHCS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2168 486 NCBIfam MATE family efflux transporter 53 448 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci14g2168 486 CDD MATE_eukaryotic 43 474 IPR045069 GO:0042910|GO:1990961
Prci14g2168 486 PANTHER MULTIDRUG RESISTANCE PROTEIN 37 471 - -
Prci14g2168 486 Pfam MatE 53 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Prci14g2168 486 Pfam MatE 273 434 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2168 Prci-Chr14 28851452 28855842 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2168 K03327 - qsa:O6P43_004274 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g2168 14 28851452 28855842 Prci14g2168 14 28851452 28855842 ECH