Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2139 ATGGCGTCCCTCATCACTGTGTTCTTGCTTTCTCTGTTTGCCTGCTACCTTGGAAGCTTTTTTGCGGAAAGCCGGAAGGGATTAAGGAGTAAGGAATTGAGCCAGAAAACTTTTTTACAATTGGAGCACTCAGTTTATCCCAACAGAATTGACCCAACGCATGTTCATCAGCTCTCTTGGCGACCAAGGGTCTTTCTCTACGAAGGTTTTTTGTCAGATAAGGAGTGTGACTACCTCATTTCCTTGGCACAAACTGTGAAAGAAAAATCCTCAGAGGTGGATCGTCATTTAGAGGGAGATGTAATGAACCAGAAGCTTACCTCAGATACTTTGTTGACCACGGAAGATGATATTATTGCAAGGATTGAAGAAAGAATTTCACTTTGGACTTTCCTTCCTAAAGAGAACAGCAAGCCTATGCAGGTCATGCATTATGGACTTGAAAGGGCCGGACAAAATTACAACATTTTTAACAAATCCGACTTGGAGTTGAGCGGATCCTTGATGGCCACAGTTGTTTTATATCTCTCAAATGTCACTCAAGGGGGCCAAATTCTCTTCCCTGAGTCAGAGCCCAAGAGTGCAAGCTGGTATGACTGTAGCAGTGATGATAGCTATCTGAAGCCGATCAAAGGGAGTGCAATTCTTTTTTTCTCTCTTCACCTTAGCGCATCTCCTGATAAAAGTAGCTCACATGCTAGATGCCCTGTCCTTGAGGGTGAAATGTGGTCTGCGACTAAATTCTTCTATGCCAGACCGGCTGGTGGGGAGAAGATCTCATCCTCATTATATGGTGGTAATGAATGTACTGATGAGGATGATAATTGTGCCACCTGGGCTGCCATGGGAGAATGTCAAAGAAATCCTGTATATATGATTGGTTCTCCTGATTACTTTGGCACGTGCAGGAAAAGCTGCAATGCATGTTGA 930 0.4376 MASLITVFLLSLFACYLGSFFAESRKGLRSKELSQKTFLQLEHSVYPNRIDPTHVHQLSWRPRVFLYEGFLSDKECDYLISLAQTVKEKSSEVDRHLEGDVMNQKLTSDTLLTTEDDIIARIEERISLWTFLPKENSKPMQVMHYGLERAGQNYNIFNKSDLELSGSLMATVVLYLSNVTQGGQILFPESEPKSASWYDCSSDDSYLKPIKGSAILFFSLHLSASPDKSSSHARCPVLEGEMWSATKFFYARPAGGEKISSSLYGGNECTDEDDNCATWAAMGECQRNPVYMIGSPDYFGTCRKSCNAC 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2139 309 Gene3D q2cbj1_9rhob like domain 54 250 - -
Prci14g2139 309 FunFam Probable prolyl 4-hydroxylase 12 54 250 - -
Prci14g2139 309 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 47 248 IPR045054 -
Prci14g2139 309 SMART p4hc 62 250 IPR006620 GO:0005506|GO:0016705|GO:0031418
Prci14g2139 309 Pfam 2OG-Fe(II) oxygenase superfamily 141 250 IPR044862 -
Prci14g2139 309 ProSiteProfiles ShKT domain profile. 269 309 IPR003582 -
Prci14g2139 309 SMART ShkT_1 268 309 IPR003582 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2139 Prci-Chr14 28718454 28722695 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2139 K00472 - gmx:100775928 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g2139 14 28718454 28722695 Prci14g2139 14 28718454 28722695 ECH