Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2010 ATGAGACTCGTGGTGCCTCTCCAAGGTGTTGTTCAAGGCAGAGGGGGCCTCCTTCTGGGCTCTCTGATCCCCTGCGCTCTCTTCTACTTCCTCCAGCTCTATCTCAAGCGGCACCGTTCCGATGGATCTTCCCGGATTCCTCTATCTCCTCCGCCATCGGAGATCCCACCAACGACCAGTGTTCAAGTGTCAAACCTCGCGAATTTTCTTGCGGAATTTGATGATTCGCCGGATGACATTGGGTTGCAGAGCCTGGCTCAGGATTCTTATGATCATGATAGATTCACTAATCCAGATAAGATGATTCAGCTGAGCTCGTCCGAGAACAAGCTCTGCTTGGATCTAATTGAGAAGTGGTTATCAGAGAACTTGAAGAAATCGCTAGTGGGGACTGATGATTTCACTCTAAGTGTCAATGGGATTGCAACTTATCAACCATTTGATGGATTGGAGGAATTGAAAATGGCCATGTCAAATTTTATGTCTCGGGTGATGGGAGGGATGGTGAAATTGGACCCATCAAATATGGTGCTTACTTCTGGAGCTACTCCTGCTATTGAGATGCTATCTTTCTGCTTGGCAAACCAGGAAGATGCTTTTCTTGTCCCGGCACCTTATTATCCAGGTTTCGACAAGGATGTGAAATGGCGAGCCAGAGTAAACCTTATACCAGTTCACTGTCAAAGCGAGGACAATTTCACTCTAAGCATCGCTACTCTTGAAGAAGTTTACCGTCAAGCTGAGAAACGCGGAGTCAAAGTTCGGGGACTTCTCTTTTCCAACCCTGCAAATCCTGTAGGCAATCTGCTGACACAGGACATGCTCAAAAGTCTGGTGCACTTTGCTAAAAATAAAAACATCCATATCATCGCTGATGAAGTACTTGCAGGATCAGTATATGAAGGAGAAAAGTTCGTGAGCTTAGCTGAAGTTCTTGATTCAGAAGGTCTAGATAAGAATCGAGTTCATATAATATATGGCCTCTCAAAAGATCTATCACTTGCAGGCTTTAGAGTAGGGGTTATATATTCATTTAACAACACTGTTCTGGCTGCTGCTAGGAAGTTAAGTAGGTTTTCTTCTATATCTGCTCCTACACAGAGGTTAGTTATTTCAATGCTTTCAGATAACAAATTTATCCCGGAGTATTTTGAAACTAAACAGAAGAGAATAAGACAAGTGCGTGATGAACTTGAGGCCGGTTTAAGTCATCTAGGAATCAAGTGTGCAAAGAGCAGTGCTGGTTTGTACTGTTGGGCCGATATGAGAGGATTGTTAAGGAAACCTCATAATGAGAGAAGAGAACTTGAGTTATGGAAGAAGTTTATAAGTGTTTCTAAGATCATTATAACTCCTGGATCAGCCTGTCATTGTATTGAACCAGGATGGTTTGGAATTTGTTTTTGTGAACTAACTTCAGAAAACATTCCTGTAATTATTGAAAGGATTAGGAAAGTTGTTGAAACTTGTAAATCTTCCTGTTAA 1485 0.4249 MRLVVPLQGVVQGRGGLLLGSLIPCALFYFLQLYLKRHRSDGSSRIPLSPPPSEIPPTTSVQVSNLANFLAEFDDSPDDIGLQSLAQDSYDHDRFTNPDKMIQLSSSENKLCLDLIEKWLSENLKKSLVGTDDFTLSVNGIATYQPFDGLEELKMAMSNFMSRVMGGMVKLDPSNMVLTSGATPAIEMLSFCLANQEDAFLVPAPYYPGFDKDVKWRARVNLIPVHCQSEDNFTLSIATLEEVYRQAEKRGVKVRGLLFSNPANPVGNLLTQDMLKSLVHFAKNKNIHIIADEVLAGSVYEGEKFVSLAEVLDSEGLDKNRVHIIYGLSKDLSLAGFRVGVIYSFNNTVLAAARKLSRFSSISAPTQRLVISMLSDNKFIPEYFETKQKRIRQVRDELEAGLSHLGIKCAKSSAGLYCWADMRGLLRKPHNERRELELWKKFISVSKIIITPGSACHCIEPGWFGICFCELTSENIPVIIERIRKVVETCKSSC 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2010 494 SUPERFAMILY PLP-dependent transferases 94 488 IPR015424 -
Prci14g2010 494 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 75 488 - -
Prci14g2010 494 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 138 154 - -
Prci14g2010 494 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 197 218 - -
Prci14g2010 494 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 251 275 - -
Prci14g2010 494 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 287 310 - -
Prci14g2010 494 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 175 195 - -
Prci14g2010 494 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 321 345 - -
Prci14g2010 494 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 353 376 - -
Prci14g2010 494 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 104 130 - -
Prci14g2010 494 CDD AAT_like 144 485 - -
Prci14g2010 494 Gene3D - 124 376 IPR015421 GO:0003824
Prci14g2010 494 Gene3D Aspartate Aminotransferase, domain 1 92 482 IPR015422 GO:0003824
Prci14g2010 494 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 327 340 IPR004838 GO:0003824|GO:0009058|GO:0030170
Prci14g2010 494 Pfam Aminotransferase class I and II 101 483 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2010 Prci-Chr14 27554479 27557253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2010 K14270 - gmx:100800539 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g2010 14 27554479 27557253 Prci14g2010 14 27554479 27557253 ECH