Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2007 ATGGAAGCATCACACTTGCATGATATCTGCACTGAGTATCAGTACAACTTTGAAGCAGCATCCACTCATATGAATCTTCCTCATGATGCCTACAAGCTTCTTGCAGTGCCGTCACCAATAGGTGGTGTTCTTGTGTTTGGTGCTAATACTATTCATTATCACAGTCAGTCTGCTTCATGTGCATTGGCGTTGAACAGTTATGCTGTTTCACTTGATAGTAGTCAAGAGTTGCCAAGATCGAATTTTAACGTGGAGCTTGATGCTGCCTATGCAACTTGGTTGTTGAGTGATGTGGCCTTGCTGTCCACAAAAAATGGTGAACTGTTGCTGCTTACTCTTGTTTATGATGGAAGGGTTGTGCAGAGACTTGATCTTTCCAAGTCAAAAGCTTCAGTTTTGTCATCTGGTATCACGACAATTGGAAATTCTTTGTTTTTTCTCGCTAGCCGATTAGGAGACAGTATGCTGGTGCAATTTTCTTGTGGATCTGGGGTTTCAACGTTGTCATCTAATCAAAAAGAAGAGGTTGGTGATATAGAAGGTGATGCTCCTTCAGCTAAGCGGCTACGCAGGTCCCCTTCTGATGCTTTGCAAGATATGGTTAGTGGTGAGGAGCTCTCCCTTTTTGGATCTGCCCCAAATAAAACAGAATCAGCACAGAAAATCTTCTCATTTGCAGTGAGGGATTCATTGATTAATGTTGGCCCTTTGAAAGACTTCTCATATGGTTTAAGGATAAATGCTGATGCAAATGCAACTGGAATTGCTAAACAAAGTAACTATGAACTGGTATGCTGTTCTGGTCATGGAAAAAATGGTTCTCTCTGTGTTCTTCGACAATCAGTTCGTCCAGAAGTGATAACTGAGGTTGAACTTCCTGGCTGCAAAGGAATTTGGACTGTTTATCATAAGAACACGCGCTCTCATAATACTGATTCTTCTAAGTTGGCAGATGATGATGATGAGTATCATGCTTTTCTTATCATAAGCTTGGAGGCTCGTACTATGGTACTGGAAACAGCTGATCTTCTGAGTGAGGTTACTGAAAGTGTTGACTATTATGTTCAAGGAAAGACACTTGCTGCCGGGAACTTGTTTGGAAGGCGTCGAGTAATTCAAGTTTATGAACGTGGTGCTCGCATTCTAGATGGTTCTTTTATGACCCAAGATGTAAGCTTTGGAGCTTCAAACTCTGAATCTAGCTCTGGATCTGAGAATGCTATTGTGTCATCTGTCTCTATTGCTGATCCATATGTATTGCTCAGAATGAGTGATGGAAGTATTCGACTTTTGGTTGGAGATCCTACTACCTGCACTGTTTCTGTCACAACTCCTTCATTTGAAAGCTCAAAAAGATCAGTATCTGCATGCACACTTTACCATGATAAAGGACCTGACCCATGGCTGAGGAAGACAAGTACTGATGCATGGCTTTCTACTGGAGTTGGTGAGGCAATTGATGGTGCTGATGGTGCAGTTCAAGATCATGGGGATATATATTGCGTTGTTTGTTATGAAAATGGTGCCCTTGAAATGTTTGATACCCCAAATTTCAGTTGTGTTTTTTCTGTGGAAAAGTTTGTGTCTGGGAAGAGCCATCTTGTTGACACTCTTGTGGTGGAGGCATCAAAAGATTCTCCAAAAGTTGATGAAGGTTCTGGTGAAGTGACTAACCAAGGCAGGAAGGAAAATGTACAGACTATGAAGGTTGTGGAGTTGGCTATGCAGAGATGGTCAGGGCAGTATTGCCGCCCTTTTATTGTTGGGATTTTGAGTGATGGAACAATTCTGTGTTACCATGCTTACTTTTATGAAGGTTCAGATGGTACTTCCAAGGTTGAGGATTTAGCATCTGCACAAGGACCTGCAGGCCTTAATGGCACTAGTGCTTCTAGGCTTAGAAATTTGAGATTTGTCCGTGCCCCCTTAGATATATATGCCAGGGAGGAGACATTGAGTGGATCCCTTTCTCAGAGAATTACTATTTTCAAGAATATAGGTGGTTACCAAGGATTTTTCTTGTCGGGATCTAGACCTGCTTGGGTTATGGTGTTGAGAGAACGGCTTCGTGTTCATCCACAGCTGTGCGATGGGTCTATTGTTGCTTTTACTGTCCTTCACAATGTGAACTGCAATCATGGCCTCATATATGTTACATCACAGGGTGTTTTAAAGATCTGCCAACTGCCTACTGGCTCAAGCTATGATAGCTACTGGCCTGTCCAGAAAATTCCGTTAAAAGCTACTCCTCATCAAGTAACCTACTTTGCAGAGAAGAATTTATATCCGCTTATAGTCTCAGTTCCTGTTCTCAAGCCACTTAATCAAGTTGTTTCATCTTTGGGTGATCAAGATGTCAACCAACAGACTGAGAATCAAAACCTGAGCTCTGATGAGCAAAACCGCTTTTATACTATTGATGAATTTGAGATTCGTATTATGGAGCCAGATAAATCTGGTGGCCCTTGGCAAACAAAAGCAATAATACCTATGCAAAGTTCTGAAAATGCTCTTACTGTGAGAATGGTTATGTTGCTGAATACAGACACAAAAGAGAATGAAACACTTTTAGCTATTGGCACTGCTTATGTGCAAGGCGAGGATGTTGCTGCAAGAGGGCGTGTCCTTCTGTTTTCTTTGGGAAAAAATACTGATAATAACCAACCTCTGGTTTCAGAGGTATACTCAAAAGAGTTGAAAGGTGCTATATCTGCTTTGGCCTCACTGCAAGGTCATCTATTAATAGCTTCTGGTCCGAAAATTATTCTGCACAAGTGGAATGGTAATGAACTGAATGGTATTGCATTTTTTGATGCTCCACCATTACATGCTGTGAGCTTAAACATTGTAAAAAACTTTATACTTATTGGTGACATCCATAAAAGCATTTACTTTCTTAATTGGAAGGAACAGGGTGCTCAACTTAGCTTATTAGCCAAGGACTTTGGTTCTCTTGATTGTTTTGCAACTGAGTTCTTGATTGATGGAAGCACTCTGAGTCTCATGGTTTCAGATGATCAAAAGAACATACAGATTTTTTACTATGCACCAAAGATGTCTGAAAGCTGGAAGGGACAGAAGCTTCTTTCAAGGGCTGAATTTCATGTTGGAGCACATGTGACTAAATTCTTGCGTTTGCAGATGCTGTCCACTGCCTCTTCTGACCGGACTGGCCATGGTCCAGGTTCAGATAAAACAAATCGTTTTGCTTTATTATTTGGAACCCTGGACGGCAGTATTGGTTGCATTGCACCACTCGATGAAATCACATTTCGGAGGCTGCAATCTTTGCAGAAAAAGCTTGTTGATGCTGTATCTCATGTTGCTGGCTTAAACCCAAAAGCTTTCAGACAGTTTCGTTCCAATGGAAAGGCCCATCGGCCAGGCCCTGACAGTATAGTTGACTGTGAACTTCTGTGCTATTATGAAATGCTTCCACTGGAGGAACAGCTTGAAATTGCTCACCAGGTCGGAACAACTCGATCACAAATTCTATCAAATCTGATTGACCTCTCGATTGGAACAAGCTTTTTGTGA 3537 0.4156 MEASHLHDICTEYQYNFEAASTHMNLPHDAYKLLAVPSPIGGVLVFGANTIHYHSQSASCALALNSYAVSLDSSQELPRSNFNVELDAAYATWLLSDVALLSTKNGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSTLSSNQKEEVGDIEGDAPSAKRLRRSPSDALQDMVSGEELSLFGSAPNKTESAQKIFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSVRPEVITEVELPGCKGIWTVYHKNTRSHNTDSSKLADDDDEYHAFLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYERGARILDGSFMTQDVSFGASNSESSSGSENAIVSSVSIADPYVLLRMSDGSIRLLVGDPTTCTVSVTTPSFESSKRSVSACTLYHDKGPDPWLRKTSTDAWLSTGVGEAIDGADGAVQDHGDIYCVVCYENGALEMFDTPNFSCVFSVEKFVSGKSHLVDTLVVEASKDSPKVDEGSGEVTNQGRKENVQTMKVVELAMQRWSGQYCRPFIVGILSDGTILCYHAYFYEGSDGTSKVEDLASAQGPAGLNGTSASRLRNLRFVRAPLDIYAREETLSGSLSQRITIFKNIGGYQGFFLSGSRPAWVMVLRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPTGSSYDSYWPVQKIPLKATPHQVTYFAEKNLYPLIVSVPVLKPLNQVVSSLGDQDVNQQTENQNLSSDEQNRFYTIDEFEIRIMEPDKSGGPWQTKAIIPMQSSENALTVRMVMLLNTDTKENETLLAIGTAYVQGEDVAARGRVLLFSLGKNTDNNQPLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWNGNELNGIAFFDAPPLHAVSLNIVKNFILIGDIHKSIYFLNWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTASSDRTGHGPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQKKLVDAVSHVAGLNPKAFRQFRSNGKAHRPGPDSIVDCELLCYYEMLPLEEQLEIAHQVGTTRSQILSNLIDLSIGTSFL 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2007 1178 Gene3D - 697 1085 IPR015943 GO:0005515
Prci14g2007 1178 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 21 428 IPR018846 -
Prci14g2007 1178 MobiDBLite consensus disorder prediction 175 193 - -
Prci14g2007 1178 Gene3D - 5 170 IPR015943 GO:0005515
Prci14g2007 1178 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 20 1163 - -
Prci14g2007 1178 MobiDBLite consensus disorder prediction 173 193 - -
Prci14g2007 1178 Pfam CPSF A subunit region 809 1143 IPR004871 GO:0003676|GO:0005634
Prci14g2007 1178 FunFam cleavage and polyadenylation specificity factor subunit 1 697 1085 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2007 Prci-Chr14 27517596 27531962 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2007 K14401 - gmx:100785543 1989.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g2007 14 27517596 27531962 Prci14g2007 14 27517596 27531962 ECH