Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g2005 ATGGCCGCCATTCCCACGCTCTCGCCCTCTCTACCCACAATTTCTCTTCAGGCTTCTCCTTCTTCAGCGTCTTCAAAGCCAAACCACGTACAATTACCTTCTGCTCTCGCTCTGAGCTCTCTTTTCGGTACCAGAATCGCGATTCAAACTTCAAGTTCATATCGTTTCCTTCCCCATGGCAAGTCTTGCCGTGCGACATCCGCCACTGTGTCTCTTAGTCTCCCATACACGAAACCCCCGGCGGCCACTCCTGAGAATCTCCCAAAATGGTCAGCAAGGGCGATCAAAGCATTTGTAATGGCGGAATTGGAAGCAAGGAAGCTCAAGTATCCCAACACAGGAACAGAAGCCCTTGTTATGGGTGTTTTAGTAGAAGGAACAAGTAAAGCTGCAAAGTTCTTACGGGCTAATGGAATCACTCTTCTCAAAGTACGGGAGGAAACTCTAGAGCTTCTTGGGAAATCTGACATGTATTTCTTTAGTCCTGAGCATCCTCCATTGACTGAACCAGCTCAGAAATCCATTGACTGGGCTGTTGAAGAGAAATTAAAGTCTGGTGAAGGTGGGGAAATAACCGTGAGTCATTTGCTTCTAGGAATTTGGTCACAAAAAGAATCAGCTGGTCACCAGATCCTGGCTGCTCTAGGTTTCAATGATGAAAAGGCCAAAGAAGTTGCTACATCATTGAACGGTGATGTTGATTTGAGCTTCAAGAAGCAAACTTAA 726 0.4628 MAAIPTLSPSLPTISLQASPSSASSKPNHVQLPSALALSSLFGTRIAIQTSSSYRFLPHGKSCRATSATVSLSLPYTKPPAATPENLPKWSARAIKAFVMAELEARKLKYPNTGTEALVMGVLVEGTSKAAKFLRANGITLLKVREETLELLGKSDMYFFSPEHPPLTEPAQKSIDWAVEEKLKSGEGGEITVSHLLLGIWSQKESAGHQILAALGFNDEKAKEVATSLNGDVDLSFKKQT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g2005 241 ProSiteProfiles Clp repeat (R) domain profile. 87 232 IPR004176 -
Prci14g2005 241 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 18 236 IPR044217 -
Prci14g2005 241 Pfam Clp amino terminal domain, pathogenicity island component 190 225 IPR004176 -
Prci14g2005 241 Pfam Clp amino terminal domain, pathogenicity island component 101 153 IPR004176 -
Prci14g2005 241 Gene3D - 89 236 IPR036628 -
Prci14g2005 241 SUPERFAMILY Double Clp-N motif 89 231 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g2005 Prci-Chr14 27509028 27513014 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g2005 - - gmx:100786582 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g2005 14 27509028 27513014 Prci14g2005 14 27509028 27513014 ECH