Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1975 ATGTCTCGGATATTCTCGAGATGGAAGAAGGTGAAAGAGATGGCGATGATTTCTTCTGCAGAGACTCAGTTCGCTGTCTCTGCAACAGGTGGTCATAAATGGACGAGGTTCAATTTTCGACTCAACCAGGTTTGCCCAATCTCGACTCACTTAAATTATTTTCCCATCGCCACCCATAGACGACGGGAATCGTTCATCAACGTTCAGGAGCGGTACAAATGGGACCACGGTGGCTCCGGCGATACCCGCAATCGGAATTCTCAGGCCCGAAAGATTCGAGCTGATGCTAATTGCCCACGTTGCGCCAGGAACATGGATGTATTTTTCTCCAATCGCCATTTCCCCACTTCCACTTCTGATTCCCATTTGATTTCTCCGGTTCCTCCTTATGAAGAAGGAGGTTATCAAACTATGAATCTCTGTCCCAATTGTAAAACAGCTTATTTCTTCCGCCCTTTTGAAACTGCGCCAATCCAAGGTACATTTGTGGAGATTGGTAGGGTCATAGATAATAAAGTTAATAATACCAGTAATAAATTGCAGAAGAGGATATCCCATGGAAAAGTCAAAGATGACCGAGAAAGTAATATTAGTCATGGCAGTAACAATGTAGCAGAAGATTATGCCCATGGGAGTAAGAGCAATAATGGGCTTAGAGAGACATTCTGGGATACCTTAAGATTCTATAATGATGGAGATGGTGGAGATCCACCAGAAACTTGGTCTCCTCCACCTGGTTCTTCTAATGGGAATGGGATTGCTGTGCATACTCCTCCAGGTCCGCCTTTTGCTCCTGGTGTTAATGTTGTTCGGGCTTCAGGGCCACGGGAGGGTGGTTCAAGCGGTGGAGGTGGGAGTAATGGAGAAAGGGCAACATGGGGAGGCTCCAATTTGGGTAAGGATTTACCCACACCAAAGGAGATCTGCAAGGGTCTTGATAAGTTTGTCATTGGCCAGAACAGGGCCAAAAAGGTGCTTTCTGTAGCTGTGTATAATCACTACAAAAGAATACACCATGCCTCTTTGCAGAAAGGGTCAGGGGCAGACTCAGCAAATTCAAAAGCTCTAGATGATGACGATATTGTGGAGCTAGAAAAGAGTAATGTTCTCCTGATGGGTCCTACAGGTTCAGGGAAGACATTGCTGGCGAAAACTCTGGCTCGATTTGTGAATGTTCCATTTGTCATTGCTGATGCAACAACCTTAACACAGGCTGGGTATGTTGGAGAAGATGTCGAATCAATATTGTATAAACTACTTGTGGCAGCTGAGTTCAATGTTCAAGCTGCTCAACAAGGGATAGTTTACATTGACGAAGTTGACAAGATAACTAAGAAGGCTGAAAGCTTAAATATTAGTCGGGATGTTTCTGGCGAGGGTGTTCAGCAGGCACTACTGAAAATGTTGGAAGGAACAATAGTAAATGTTCCTGAAAAAGGTGCAAGGAAGCATCCACGGGGTGATAACATACAGATTGACACAAAGGATATTCTCTTTATATGTGGTGGAGCATTCATTGACCTTGATAAAACAATATCAGAAAGACGACAGGATTCTTCTATTGGTTTTGGAGCTCCAGTTCGTGCAAATATGAGAACCAATAGAGTAATAAATGTTGAAGTAACATCAGCATTACTTGAGTCGGTGGAAAGTTCTGATCTGATTGCATATGGTCTCATACCTGAGTTTATTGGAAGGTTTCCAATTTTAGTTAGTTTATCCGCCTTAACAGAAGATCAGCTTGTGCAGGTCCTCACAGAACCAAAGAATGCTCTTGGTAAGCAGTACAAGAAATTAATTGGAATGAATAATGTTGAGCTTCATTTCACGGAGAAGGCACTCAGATTGATTGCACAGAAAGCAATGGCCAAGAACACTGGCGCCAGGGGTTTAAGAGCCATACTGGAAAGCATCCTAACTGATGCCATGTTTGAGATTCCTGATGTTAGGACTGGGAATGATCGGATCGATGCAGTAGTCGTCGATGAGGAGTCGGTTGGATCAGTAGATGCCTTGGGATGTGGAGGCAAAATTCTTCGTGGACAAGGTGCTTTGGAGGATTACCTTGCGAAGATGAAGGATTCAGTGGTCAATGGTGAGGTAGCTGAATCAGATGTGCAAGAGGGGGAAACAGAGAGGGCCATGAGCATGTGA 2154 0.4415 MSRIFSRWKKVKEMAMISSAETQFAVSATGGHKWTRFNFRLNQVCPISTHLNYFPIATHRRRESFINVQERYKWDHGGSGDTRNRNSQARKIRADANCPRCARNMDVFFSNRHFPTSTSDSHLISPVPPYEEGGYQTMNLCPNCKTAYFFRPFETAPIQGTFVEIGRVIDNKVNNTSNKLQKRISHGKVKDDRESNISHGSNNVAEDYAHGSKSNNGLRETFWDTLRFYNDGDGGDPPETWSPPPGSSNGNGIAVHTPPGPPFAPGVNVVRASGPREGGSSGGGGSNGERATWGGSNLGKDLPTPKEICKGLDKFVIGQNRAKKVLSVAVYNHYKRIHHASLQKGSGADSANSKALDDDDIVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLVAAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLDKTISERRQDSSIGFGAPVRANMRTNRVINVEVTSALLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLIGMNNVELHFTEKALRLIAQKAMAKNTGARGLRAILESILTDAMFEIPDVRTGNDRIDAVVVDEESVGSVDALGCGGKILRGQGALEDYLAKMKDSVVNGEVAESDVQEGETERAMSM 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1975 717 CDD RecA-like_ClpX 303 573 - -
Prci14g1975 717 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 94 693 - -
Prci14g1975 717 Gene3D - 296 574 IPR027417 -
Prci14g1975 717 Pfam C-terminal, D2-small domain, of ClpB protein 576 645 IPR019489 -
Prci14g1975 717 FunFam ATP-dependent Clp protease ATP-binding subunit ClpX 575 677 - -
Prci14g1975 717 Pfam AAA domain (Cdc48 subfamily) 365 569 IPR003959 GO:0005524|GO:0016887
Prci14g1975 717 Gene3D - 575 673 - -
Prci14g1975 717 MobiDBLite consensus disorder prediction 180 216 - -
Prci14g1975 717 NCBIfam ATP-dependent protease ATP-binding subunit ClpX 299 666 IPR004487 GO:0005524|GO:0006457|GO:0051082|GO:0140662
Prci14g1975 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 301 662 IPR027417 -
Prci14g1975 717 MobiDBLite consensus disorder prediction 230 302 - -
Prci14g1975 717 SMART ClpB_D2_small_2 576 669 IPR019489 -
Prci14g1975 717 SMART AAA_5 365 527 IPR003593 GO:0016887
Prci14g1975 717 FunFam CLP protease regulatory subunit CLPX3 mitochondrial 296 574 - -
Prci14g1975 717 MobiDBLite consensus disorder prediction 198 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1975 Prci-Chr14 27355565 27362861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1975 369 468 Miscellaneous Gene Families AT3G02450 36.634 6.48e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1975 K03544 - qsa:O6P43_005462 1041.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g1975 14 27355565 27362861 Prci14g1975 14 27355565 27362861 ECH