Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g1778 ATGGCAGATCAGAACCAAAAACCAGAGCTCTTTGAACTCAACAATGGAACCATGCATGTCCTCATCACCAATGTCGGATGTGCGATCACTTCCTTGTCGGTGCCTGGCAAAGATGGAACCTTGTCTGACGTTGTTCTCGGGTTCGACTCCGTGGATCCGTATCTGAACGGTGTTGCTCCTTACTTTGGCTGCATTGTGGGTCGGGTTGCCAACAGAATCAAAGATGGGAAGTTTACACTTGATGGGGTTCAATACTCTTTGCCTGTCAACAAACCCCCAAACAGTCTCCATGGTGGTAACGTGGGGTTTGATAAGAAGGTGTGGGAAGTTATTGAATATAAGAAAGGTGAAACCCCTTCGATCACTTTTAAGTATCACAGTAAGGATGGGGAAGAAGGTTATCCTGGGGACATCACTGTTACTGTAACTTACACACTCACTTCTAAGACAACTCTAAGGCTTGACATGGAAGGAGTGCCAAAGGACAAGCCCACTCTTTTGAATCTAGCGCAGCATACTTACTGGAACTTAGCAGGCCACAGCTCGGGGAATATACTTGACCATTCAATTCAGATATGGGCTAATCATATCACTCCTGTGGATGAGAATACTGTACCAACTGGTGAAATTAAGCCAGTGAAGGGTACCCCATTTGATTTTACATCCGAGAAGAGGATAGGTGACACCATCAATCAGGTCGGAATAGGATATGACCACAACTACGTGCTTGAGGGCGGCGATGAGAAGGAGGGTTTAAAACATGCTGCAAAAGTGAGGGATCCCTCAAGCTCTAGGGTTTTGAACCTGTGGACAGATGCTCCTGGCATGCAATTTTACACGGGGAACTATGTCAATGGTGTTTCAGGAAAACAAGGTGCTGTTTATGGAAAGCATGCAGGGCTCTGCTTGGAGACACAGGTATTCCCAGATGCCATAAACCATCCAAATTTCCCATCTGTTGTCGTCCGACCTGGTCAGAAATACCAACATTCCATGTTGTTTGAGTTTTCCGTTGGGTGA 1020 0.4608 MADQNQKPELFELNNGTMHVLITNVGCAITSLSVPGKDGTLSDVVLGFDSVDPYLNGVAPYFGCIVGRVANRIKDGKFTLDGVQYSLPVNKPPNSLHGGNVGFDKKVWEVIEYKKGETPSITFKYHSKDGEEGYPGDITVTVTYTLTSKTTLRLDMEGVPKDKPTLLNLAQHTYWNLAGHSSGNILDHSIQIWANHITPVDENTVPTGEIKPVKGTPFDFTSEKRIGDTINQVGIGYDHNYVLEGGDEKEGLKHAAKVRDPSSSRVLNLWTDAPGMQFYTGNYVNGVSGKQGAVYGKHAGLCLETQVFPDAINHPNFPSVVVRPGQKYQHSMLFEFSVG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g1778 339 CDD galactose_mutarotase_like 10 336 IPR047215 GO:0016853
Prci14g1778 339 Gene3D - 1 339 IPR014718 GO:0030246
Prci14g1778 339 Pfam Aldose 1-epimerase 10 334 IPR008183 GO:0005975|GO:0016853
Prci14g1778 339 SUPERFAMILY Galactose mutarotase-like 4 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
Prci14g1778 339 PIRSF GALM 1 339 IPR015443 GO:0016853|GO:0019318
Prci14g1778 339 PANTHER ALDOSE-1-EPIMERASE 7 338 - -
Prci14g1778 339 FunFam Aldose 1-epimerase 2 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g1778 Prci-Chr14 25203142 25205912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g1778 6 337 Miscellaneous Gene Families AT3G47800 50.602 4.37e-110 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g1778 K01785 - gmx:100776238 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g1778 14 25203142 25205912 Prci14g1778 14 25203142 25205912 ECH