Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0817 ATGGCTTCCTCCATGCTCTCTTCCGCGGCCGTCGCCGCCACTCCGGCACAGACCAACAGGGTGGCCGCCTTCACCGGTCTCAAATCCGGCGCCGGCTTACCCGTCAGCAAGAAGACCAACACCGACATCACCTCCATTGCTAGCAATGGTGGCAGAGTAAGCTGCATGCTGGTGTGGCCCACAGTGGGCAAAAAGAAGTTTGAGACTCTCTCCTACCTCCCACCTCTCTCCAAAGAATCTCTGCTCAAGGAAGTTGAATACCTTCTCAGAATGGGATGGGTTCCTTGCTTGGAATTCACACTTGGTAACGCATTTGTGTACCGTGAGAACCACAAGTCACCGGGGTACTACGACGGAAGATACTGGACAATGTGGAAGCTGCCCATGTTTGGATGCACAGACGCTATTCAGGTGGTGAAGGAGCTTGACGAGGCTGTAAAGACCAACCCTACTTCTCACGTCAGAATCATCGGATTCGACAACGTTCGTCAAGTGCAGTGCATCAGCTTCATCGCCTACAGGCCTCCACCCCCACCCCCACCCCGCCCTTGA 552 0.5489 MASSMLSSAAVAATPAQTNRVAAFTGLKSGAGLPVSKKTNTDITSIASNGGRVSCMLVWPTVGKKKFETLSYLPPLSKESLLKEVEYLLRMGWVPCLEFTLGNAFVYRENHKSPGYYDGRYWTMWKLPMFGCTDAIQVVKELDEAVKTNPTSHVRIIGFDNVRQVQCISFIAYRPPPPPPPRP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0817 183 Hamap Ribulose bisphosphate carboxylase small subunit [cbbS]. 65 176 IPR000894 -
Prci14g0817 183 SMART RuBisCO_small_2_a 66 175 IPR000894 -
Prci14g0817 183 CDD RuBisCO_small 65 173 IPR000894 -
Prci14g0817 183 FunFam Ribulose bisphosphate carboxylase small chain, chloroplastic 56 178 - -
Prci14g0817 183 Pfam Ribulose-1,5-bisphosphate carboxylase small subunit 2 42 IPR024680 -
Prci14g0817 183 SUPERFAMILY RuBisCO, small subunit 56 176 IPR036385 -
Prci14g0817 183 Gene3D Ribulose bisphosphate carboxylase, small subunit 56 180 IPR036385 -
Prci14g0817 183 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1, CHLOROPLASTIC 1 176 IPR024681 -
Prci14g0817 183 PRINTS RuBisCO small subunit signature 65 91 IPR024681 -
Prci14g0817 183 PRINTS RuBisCO small subunit signature 44 62 IPR024681 -
Prci14g0817 183 PRINTS RuBisCO small subunit signature 115 144 IPR024681 -
Prci14g0817 183 PRINTS RuBisCO small subunit signature 17 34 IPR024681 -
Prci14g0817 183 PRINTS RuBisCO small subunit signature 149 175 IPR024681 -
Prci14g0817 183 PRINTS RuBisCO small subunit signature 93 108 IPR024681 -
Prci14g0817 183 Pfam Ribulose bisphosphate carboxylase, small chain 67 175 IPR000894 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0817 Prci-Chr14 7174695 7175836 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0817 K01602 - egr:104425787 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g0817 14 7174695 7175836 Prci14g0817 14 7174695 7175836 ECH