Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0290 ATGGCTGCAGAAGCAACGGCAGAGAAGAAACTTGCGGATTTTGAACCTCAAAAGAAACCCAAAAGGAACAAGTATGCTTCTGCTTGTGCCATCCTCGCCTCCATGACTTCCATCCTACTCGGTTATGATATAGGGGTGATGAGTGGAGCGGCCATGTATATAAAGAGAGACCTCAAGGTGTCGGACGTCCAAATCGAGATCTTGATGGGGATAATCAATCTCTACTCTCTCATAGGGTCTTGCCTCGCCGGAAGAACCTCCGACTGGATTGGCCGGAGATATACCATTGTGCTGGCCGGAGGGATCTTCTTCGCCGGGGCCATTCTCATGGGATTCTCCACCAACTACGCTTTCCTCATGTGCGGTCGATTCGTCGCCGGCATTGGTATCGGTTACGCCCTCATGATCGCCCCCGTCTATACCGCCGAGGTCTCGCCGGCTTCCTCTCGTGGCTTCCTCACTTCCTTCCCTGAGGTTTTCATCAATGGAGGAATATTACTTGGATACATTTCAAACTACGCATTTTCGAAGCTGCCGCTTCGCTTGGGCTGGCGGCTCATGCTGGGAGTCGGCGCCATTCCTTCTGTAATTCTAGGCGTGGGGGTCTTGGCCATGCCAGAGTCTCCTCGCTGGCTCGTTATGCGCGGTCGGCTCGGCGAAGCCAGACGAGTTCTCGCCAAGACCTCAGACTCCAAGGAAGAGGCTCGGCTCAGGCTAGCCGACATCAAGGAAGCCGCCGGTATCCCGGAAGGCTGCAACGACGACGTCATTCATGTGACTGCAAAGCAAAATCTAGGCGAAGGAGTTTGGAAAGAACTGTTCCTCCACCCAACGCCAGCCGTCCGTCACATCGTGATCGCCGCCCTGGGAATTCACTTCTTCCAACAAGCCTCCGGCATAGACGCCGTCGTTTTGTACAGCCCAACGATCTTCAAAAAAGCCGGCATCACTTCCGACACTGATCTGCTTCTCGCCACCATAGCCGTCGGATTCGTGAAGACCATCTTCATCCTGGTGGCGACGTTTATGTTGGATCGCGTCGGGCGACGCCCGTTATTGTTGAGTAGTGTTGGTGGGATGGTACTTTCACTCGTCACTCTGGCGGCGACCCTCACGGTCATCGACCATTCGAAGGCCAAGTTAATGTGGGCCATTGTTTTGAGTATAGCAATGGTGTTGTCGTACGTGGCTACATTTTCTATCGGAGCGGGTCCCATCACATGGGTTTATAGCTCGGAGATATTTCCGTTGAAGCTACGCGCTCAGGGTGCGGCTGCGGGAGTGGTGGTGAATAGGGTGACAAGTGGGGTGATCTCAATGACCTTTTTGTCCTTGGAGAAGGCCATTACAATAGGTGGGGCCTTCTTTCTGTTTGGGGGAATTGCGACCGTTGGATGGATCTTCTTCTTCACCATGCTCCCGGAAACACAAGGGAAAACCCTAGAAGAAATGGAAGGGTCTTTTGGTAAATTCAGGAAAAATTCCAGCACTGCTAACGGAGTCAACCATGTCCACAAAGTTAACGGTAACGGCCAAATCCAACTAAGTTGA 1551 0.5274 MAAEATAEKKLADFEPQKKPKRNKYASACAILASMTSILLGYDIGVMSGAAMYIKRDLKVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVLAGGIFFAGAILMGFSTNYAFLMCGRFVAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYAFSKLPLRLGWRLMLGVGAIPSVILGVGVLAMPESPRWLVMRGRLGEARRVLAKTSDSKEEARLRLADIKEAAGIPEGCNDDVIHVTAKQNLGEGVWKELFLHPTPAVRHIVIAALGIHFFQQASGIDAVVLYSPTIFKKAGITSDTDLLLATIAVGFVKTIFILVATFMLDRVGRRPLLLSSVGGMVLSLVTLAATLTVIDHSKAKLMWAIVLSIAMVLSYVATFSIGAGPITWVYSSEIFPLKLRAQGAAAGVVVNRVTSGVISMTFLSLEKAITIGGAFFLFGGIATVGWIFFFTMLPETQGKTLEEMEGSFGKFRKNSSTANGVNHVHKVNGNGQIQLS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0290 516 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci14g0290 516 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci14g0290 516 PRINTS Sugar transporter signature 295 305 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci14g0290 516 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci14g0290 516 PRINTS Sugar transporter signature 120 139 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci14g0290 516 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 23 491 IPR045262 GO:0015144
Prci14g0290 516 FunFam probable polyol transporter 4 19 491 - -
Prci14g0290 516 CDD MFS_PLT 32 484 IPR044776 GO:0005351
Prci14g0290 516 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 477 IPR020846 GO:0022857
Prci14g0290 516 Gene3D MFS general substrate transporter like domains 19 491 IPR036259 -
Prci14g0290 516 NCBIfam sugar porter family MFS transporter 16 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Prci14g0290 516 ProSitePatterns Sugar transport proteins signature 1. 83 100 IPR005829 GO:0016020|GO:0022857|GO:0055085
Prci14g0290 516 ProSitePatterns Sugar transport proteins signature 2. 125 150 IPR005829 GO:0016020|GO:0022857|GO:0055085
Prci14g0290 516 SUPERFAMILY MFS general substrate transporter 15 485 IPR036259 -
Prci14g0290 516 Pfam Sugar (and other) transporter 29 486 IPR005828 GO:0016020|GO:0022857|GO:0055085
Prci14g0290 516 Coils Coil 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0290 Prci-Chr14 2235069 2238531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0290 16 515 Organic Solute Cotransporters AT3G18830 72.600 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0290 - - gmx:100800461 806.594