Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0273 ATGGCCACCACTCTCCTCTACCTCTCCCTCTTCCTCTTGGCCTTTTCCTCTGCCGAGTCGCAATCCTTCATCGGCGTGAATTATGGCCAGGTAGCCGACAACCTTCCGACGCCGGAGGCGACGGCGAAGCTACTCCAGACCACCACCATTGGTAAAATCCGGCTGTATGGCGCCGATGCTGCGATCATCAAAGCCCTTGCAAACTCTGGAATCGGAATCGTCATCGGTGCCGCCAACGGTGACATTCCGAGCCTAGCCTCCGATCCTAACTCGGCGACTCAATGGATCAAGACCAACGTGCAGCCCTTCTACCCATCCAGCAACATCACTTTGATCACCGTCGGTAACGAGGTCATGACCTCCGGCGACCAGGGTTTGATCTCGAAGCTCCTTCCGGCAATGCAAAATGTCCAAAACGCCCTCAACTCTGCCGGGCTCGGCGGCGACAAGATCAAAGTATCGACCGTGCATTCGATGGCGGTGTTGACCCAGTCGGATCCACCGTCTTCCGGGGCGTTCGACCCGGCGCTCCGAGACACGTTGAAGCAGTTGCTGGCGTTTCAGAAGGAAAACAAATCTCCCTTCGCGATCAACCCGTACCCGTTTTTCGCATATCAGAGCGACCCGAGACCGGAAACGCTGGCGTTCTGCCTTTTCCAACCTAACTCGGGTCGGGTTGATTCGGGTAATGGAAAGCGTTACACCAGCATGTTCGATGCCCAGGTTGATGCTGTTCATTCCGCATTGAGTAGTGTAGGATTTGATGACGTGGAGATCATGGTGGCGGAGACAGGTTGGCCGTCACACGGGGATAGCAATGAGGTGGGACCGAGTGTTGAGAATGCAAAGGCCTATAACGGCAACCTCATTGCTCATCTGAGATCATTAGTTGGGACCCCTTTGATGCCTGGAAAATCTGTGGACACTTTCATTTTTGCACTCTATGATGAGGACTTGAAGCCTGGTCCTGCATCAGAACGCTCCTTTGGCCTCTTCAAAACCGATCTTACCATGACTTATGATGTTGCCCTCACCAAGACCAGCCAGCAGACTCCAACTAATCCCAAGACTCCGGTTATGCCAGCGCCTACAAGTGCGCCCGGATGGTGTGTGGCGAAAACCGGCGTGTCTGATACTCAGTTGCAGGCGAACTTGGACTATGCTTGCAGCCACGGGATAGACTGTGGACCAATTCAACCGGGAGGGGCTTGTTTTGAACCAAACACAGTAGCCTCTCATGCTGCTTATGCCATGAATCTGTATTACCAAACACAAGGCAAAAATCCTTGGAACTGTGATTTCTCTCAGACAGCAACGCTCACATCCCAAAATCCAAGTTACAATGCTTGCACTTACCCTGGTGGGAGTACTTGA 1374 0.532 MATTLLYLSLFLLAFSSAESQSFIGVNYGQVADNLPTPEATAKLLQTTTIGKIRLYGADAAIIKALANSGIGIVIGAANGDIPSLASDPNSATQWIKTNVQPFYPSSNITLITVGNEVMTSGDQGLISKLLPAMQNVQNALNSAGLGGDKIKVSTVHSMAVLTQSDPPSSGAFDPALRDTLKQLLAFQKENKSPFAINPYPFFAYQSDPRPETLAFCLFQPNSGRVDSGNGKRYTSMFDAQVDAVHSALSSVGFDDVEIMVAETGWPSHGDSNEVGPSVENAKAYNGNLIAHLRSLVGTPLMPGKSVDTFIFALYDEDLKPGPASERSFGLFKTDLTMTYDVALTKTSQQTPTNPKTPVMPAPTSAPGWCVAKTGVSDTQLQANLDYACSHGIDCGPIQPGGACFEPNTVASHAAYAMNLYYQTQGKNPWNCDFSQTATLTSQNPSYNACTYPGGST 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0273 457 ProSitePatterns Glycosyl hydrolases family 17 signature. 257 270 IPR000490 GO:0004553|GO:0005975
Prci14g0273 457 FunFam Glucan endo-1,3-beta-glucosidase 14 22 350 - -
Prci14g0273 457 Pfam Glycosyl hydrolases family 17 24 342 IPR000490 GO:0004553|GO:0005975
Prci14g0273 457 Gene3D - 365 452 - -
Prci14g0273 457 Pfam X8 domain 369 439 IPR012946 -
Prci14g0273 457 Gene3D Glycosidases 23 351 - -
Prci14g0273 457 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 441 IPR044965 GO:0004553|GO:0005975
Prci14g0273 457 SUPERFAMILY (Trans)glycosidases 24 342 IPR017853 -
Prci14g0273 457 FunFam glucan endo-1,3-beta-glucosidase 7 364 453 - -
Prci14g0273 457 SMART X8_cls 368 452 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0273 Prci-Chr14 2090392 2094940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0273 18 453 Miscellaneous Gene Families AT2G16230 67.277 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0273 - - gmx:100778892 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g0273 14 2090392 2094940 Prci14g0273 14 2090392 2094940 ECH