Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0221 ATGGCCAATGATTCTGCTGCAATGTCCAACGGCAATGCCAATTCACATCCTAATCCACAGAGGAATTACCAAGTGGTTGTAGCTGCAACCCAGGATATGGGTATTGGTAAGGATGGGAAACTACCCTGGAGACTGCCTGCTGATCTCAAGTTTTTTAAGGAGATCACTTCAATGACATCTGATTCTGGGAAGAAGAATGCAGTGATAATGGGTAGAAAAACATGGGAGAGTATCTCTCTTGAGTACCGCCCTCTTCCTGGACGCCTTAATGTTGTTCTCACTCGCTCGGGAAGCTTTGACATTGCAACTGTGGAGAATGTTGTTATATGTGGAAGCATGTCTTCTGCTTTGGAATTGTTGGCTTCTTCTCCTTACTGTCTATCAATTGAGAAAGTATTTGTTATAGGAGGTGGCCAAATATTTAGAGAGGCTCTAAGTGCACCTGCATGTGAAGCTATCCACATTACTGAGATCGAGACAAAAATTGACTGTGATACTTTCATGCCTCCAATTGATTCCTCTGTATTTCAGCCATGGTACTCTTCCTTTCCTAGGGTGGAGAACAACATCCGCTATTGTTTTACCACATATGTACGAGTAAGGAGTTCTAAAGCAGAATCCCTGAGTCAGAATTCTGATCAACTTTGCGATACTAGATCAGATTCCTCAAAATTTGAGGTCAAGAACTTCTCTTTCCTTCCTAAAATGATTTTTGAGAGACATGAGGAGAATATTTATCTCAATCTGGTCCAAGATATCATCTCTGAAGGCACTGCTAAGGATGATAGGACTGGGACTGGCACCTTCTCAAAATTTGGTTGCCAGATGAGGTTTAATTTGCGCAGGACCTTTCCCCTTTTAACTACTAAGAAAGTATTTTGGCGCGGGGTTGTTGAAGAGCTTCTTTGGTTTATAAGTGGTTCAACAAATGCCAAGGTGCTGCAGAAAAAGGGCATCCATATATGGGATGGCAATGCATCCAGAGAATACCTTGATAGTGTTGGATTGGCAGAAAGGGAGGAGGGTGACTTGGGACCTGTTTATGGGTTTCAGTGGAGGCACTTCGGTGCCAAGTATACTGACATGCATGCTGATTACTCTGGCAAAGGATTTGATCAGCTTTTAGATGTTGTTAACAAGATAAAGCATAATCCTGATGATCGGCGGATTATTCTCTCAGCTTGGAATCCGGTAGATCTTAAATTGATGGCCCTTCCACCCTGCCACATGTTTGCACAGTTCTATGTAGCAAATGGGGAGTTATCTTGTCAAATGTATCAGCGATCTGCAGACGTGGGCCTGGGCGTGCCCTTTAATATTGCATCTTATGCTCTCCTGACATGCATGATTGCTCATGTTTGTGAGCTTGTTCCAGGCGATTTTGTTCATGTTATTGGGGATGCACACATTTACCGCAATCACGTGAGACCTTTGCAGGAGCAGCTCCGGAACCTTCCTAAACCCTTTCCGATTTTGAAGATAAATCCAAAAAAGGACATAGATTCTTTTGTGGCTTCTGATTTCAAGCTTATAGGTTATGATCCTTACCAGAAAATAGAAATGAAGATGGCTGTGTAA 1578 0.4271 MANDSAAMSNGNANSHPNPQRNYQVVVAATQDMGIGKDGKLPWRLPADLKFFKEITSMTSDSGKKNAVIMGRKTWESISLEYRPLPGRLNVVLTRSGSFDIATVENVVICGSMSSALELLASSPYCLSIEKVFVIGGGQIFREALSAPACEAIHITEIETKIDCDTFMPPIDSSVFQPWYSSFPRVENNIRYCFTTYVRVRSSKAESLSQNSDQLCDTRSDSSKFEVKNFSFLPKMIFERHEENIYLNLVQDIISEGTAKDDRTGTGTFSKFGCQMRFNLRRTFPLLTTKKVFWRGVVEELLWFISGSTNAKVLQKKGIHIWDGNASREYLDSVGLAEREEGDLGPVYGFQWRHFGAKYTDMHADYSGKGFDQLLDVVNKIKHNPDDRRIILSAWNPVDLKLMALPPCHMFAQFYVANGELSCQMYQRSADVGLGVPFNIASYALLTCMIAHVCELVPGDFVHVIGDAHIYRNHVRPLQEQLRNLPKPFPILKINPKKDIDSFVASDFKLIGYDPYQKIEMKMAV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0221 525 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 232 525 IPR036926 -
Prci14g0221 525 MobiDBLite consensus disorder prediction 1 20 - -
Prci14g0221 525 ProSitePatterns Thymidylate synthase active site. 388 416 IPR020940 GO:0004799|GO:0006231
Prci14g0221 525 CDD DHFR 26 198 IPR001796 GO:0004146|GO:0046654
Prci14g0221 525 PRINTS Thymidylate synthase family signature 459 476 IPR000398 GO:0004799|GO:0006231
Prci14g0221 525 PRINTS Thymidylate synthase family signature 421 447 IPR000398 GO:0004799|GO:0006231
Prci14g0221 525 PRINTS Thymidylate synthase family signature 377 396 IPR000398 GO:0004799|GO:0006231
Prci14g0221 525 PRINTS Thymidylate synthase family signature 284 305 IPR000398 GO:0004799|GO:0006231
Prci14g0221 525 PRINTS Thymidylate synthase family signature 403 418 IPR000398 GO:0004799|GO:0006231
Prci14g0221 525 Gene3D Dihydrofolate Reductase, subunit A 4 201 IPR024072 -
Prci14g0221 525 Hamap Thymidylate synthase [thyA]. 243 525 IPR000398 GO:0004799|GO:0006231
Prci14g0221 525 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 223 525 IPR036926 -
Prci14g0221 525 ProSitePatterns Dihydrofolate reductase (DHFR) domain signature. 34 56 IPR017925 GO:0004146
Prci14g0221 525 CDD TS_Pyrimidine_HMase 245 479 IPR023451 -
Prci14g0221 525 Pfam Dihydrofolate reductase 24 199 IPR001796 GO:0004146|GO:0046654
Prci14g0221 525 PIRSF DHFR-TS 6 525 IPR012262 GO:0004146|GO:0004799|GO:0006730
Prci14g0221 525 PANTHER THYMIDYLATE SYNTHASE 1 46 525 IPR045097 GO:0016741
Prci14g0221 525 SUPERFAMILY Dihydrofolate reductase-like 19 199 IPR024072 -
Prci14g0221 525 ProSiteProfiles Dihydrofolate reductase (DHFR) domain profile. 22 199 IPR001796 GO:0004146|GO:0046654
Prci14g0221 525 FunFam Bifunctional dihydrofolate reductase-thymidylate synthase 5 200 - -
Prci14g0221 525 FunFam Possible thymidylate synthase 237 525 - -
Prci14g0221 525 Pfam Thymidylate synthase 245 525 IPR023451 -
Prci14g0221 525 NCBIfam thymidylate synthase 339 525 IPR000398 GO:0004799|GO:0006231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0221 Prci-Chr14 1776901 1782068 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0221 K13998 - cit:102610005 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci14g0221 14 1776901 1782068 Prci14g0221 14 1776901 1782068 ECH