Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0171 ATGAAACTCCTCAAATTCCATGGCCTCGCTCTGTTCACCGTCTTCCTTACTTTGTTGCCCGATCTTGGGATCGCTCATGATTACAGAGAAGCATTGTCGAAGGCGATCCTGTTCTTCGAGGGCCAACGATCGGGGTATCTGCCGGACGACCAGAGAATGAAATGGAGAGACCATTCAGGCCTGAGCGACGGGTGGACTTACAACACAGACCTCACCGGCGGCTACTACGACGCTGGCGACAACGTGAAGTTTGGGTTCCCCATGGCGTTCACTGCCACAATGCTGGCCTGGAGCGTCGTCGAATTCGGAGACGACATGCCTCCCGAGGAGCTTCGGAATTGCCTCGTTGCTATACGTTGGGCCACCGATTACTTGCTCAAGGCCGTGTCTCAGCCCGATCGGATTTTCGTTCAGGTGGGTGATCCAAGCTCAGACCACAACTGCTGGGAGAGGCCAGAGGACATGGACACGGACAGGACGGTTTATGCCATCGATGCGCCAAATCCAGCCTCTGACATCGCCGGCGAAACGGCGGCGGCGCTGGCAGCTTCGTCCATGGTGTTCCGATCGTCGGACCCTGGATATTCCGAGACATTGCTGAGAAATGCGATCAAGGCCTTTCAGTATGCTGATAACTACAGAGGTGCTTACACTGACAACGATCACGTTAGGGACGGTGCGTGCCCTTATTACTGCAACTTTGGTGGCTATCAGACGATACAGGACGAGCTGTTATGGGGAGCGGCGTGGATAAGGAGGGCCACAGGGGACGATGATTTCTTAAATTACATTCAATACAATGCCAAAACGTTCGGTGCTGATGATAACATCAATGAGTTTGGCTGGGAAAACAAGCATGCTGGCCTCAACGTTCTTGTCTCCCAGGAAGTGGTAGAAGGAAACTTGTACTCTCTACAATCCTACAGGGACTCAGCAGAGAGCTTCGTATGCACACTGGTACCCCAATCACCAACGTCACAGATCCAATACACTCCTGGAGGCCTCATTTACAGACCCGGAGGCAGCAATCTACAACACGCCACCTCTCTCTCTTTCCTTCAACTTGTCTACGCCAAGTATCTCTCTCGCTCCTCCCAAACCCTCACTTGTGGCACCCTCTCCAACATCACTCCTCAAACCCTTCGTCACATCGCCAAGAGACAAGTTGACTACATCTTAGGGGACAACCCCATGGGACTCTCCTACATGGTCGGATACGGTGACCATTACCCTCAGAGGATTCACCATCGTGGCTCTTCCCTGCCTTCCACTAAGGACCATCCTCAGTTCATTGCATGCAAGGAAGGCTCTGTCTATTTCAATTCTTCTAACCCTAACCCTAATCTTCTTGTGGGAGCCGTTGTTGGAGGGCCAGAGGACGATGATGAGTACGAGGATGATCGAGCCAATTTCAGAAAATCTGAGCCCACCACGTATATTAATGCTCCTTTTGTTGGGGTTTTAGCCTACTTTGCTGCTCATCCTAACCCTTGA 1494 0.5207 MKLLKFHGLALFTVFLTLLPDLGIAHDYREALSKAILFFEGQRSGYLPDDQRMKWRDHSGLSDGWTYNTDLTGGYYDAGDNVKFGFPMAFTATMLAWSVVEFGDDMPPEELRNCLVAIRWATDYLLKAVSQPDRIFVQVGDPSSDHNCWERPEDMDTDRTVYAIDAPNPASDIAGETAAALAASSMVFRSSDPGYSETLLRNAIKAFQYADNYRGAYTDNDHVRDGACPYYCNFGGYQTIQDELLWGAAWIRRATGDDDFLNYIQYNAKTFGADDNINEFGWENKHAGLNVLVSQEVVEGNLYSLQSYRDSAESFVCTLVPQSPTSQIQYTPGGLIYRPGGSNLQHATSLSFLQLVYAKYLSRSSQTLTCGTLSNITPQTLRHIAKRQVDYILGDNPMGLSYMVGYGDHYPQRIHHRGSSLPSTKDHPQFIACKEGSVYFNSSNPNPNLLVGAVVGGPEDDDEYEDDRANFRKSEPTTYINAPFVGVLAYFAAHPNP 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0171 497 PANTHER ENDO-1,4-BETA-GLUCANASE 13 492 - -
Prci14g0171 497 SUPERFAMILY Six-hairpin glycosidases 26 494 IPR008928 GO:0005975
Prci14g0171 497 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 464 482 IPR033126 -
Prci14g0171 497 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 391 417 IPR018221 -
Prci14g0171 497 Gene3D - 24 494 IPR012341 GO:0005975
Prci14g0171 497 Pfam Glycosyl hydrolase family 9 28 488 IPR001701 GO:0004553|GO:0005975
Prci14g0171 497 FunFam Endoglucanase 24 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0171 Prci-Chr14 1446224 1449715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0171 9 494 Glycoside Hydrolase AT1G70710 59.465 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0171 K01179 - gmx:100101849 799.66