Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0151 ATGGAAGTTAGCCTCACTTCCAATCACTATACTCTGAGCTCAACCTCACGTTCTCCTTCTGCTTTCTCTCTTTCCAATCTCCGATCCTTCCGCTCGCAGTTCCTTGGTTGTTCTCATAATCTCAGGCCTCCCGGATGTCTTAGCTTTAGAAATAATAAATGCAAGAAATTGCGGCTTCTTCAACTCCATTCTCCTCGTTTTATCTTCAAAGCATCTTTGAGTTCTCACTCCGTCGTCGTCGTCGTCACTTTAGTTACTTTATCTGCCGTTTCTCTTTTCTACTATAATTACATCAAGAGAAAGAAGAACCCCAGAGAGATACTGGGACAACCAAAATTTGCATTATCACAGCAAGGAAGTAATATTGGGAACCAGGGCATCGAAAGTCAGATTCTTTGTTTTCAGGAATTTCAAGGGGAGAGCTTGCTTAAGGAAATTGGGATATTGGAGGATAAATCTGACAAAGAAAATGATGATTTTGAGGGAAAAGAGGCCCAACTAACATATTGGACATCTCCTATGGTGCAAGAAGGGGCCGTTGCGACTAAGAAGTTAGAGTCACCTTCTGATGTTCTGACCTCTAGCATTAACAGTGCTTCATCTTCGAACAGGTCCAAGGCTGTAGAGGAATCTTGTGTGTCCATGGAATTCCAATCAAGTTCTTTTGAGCCTCTGTCTTTTGCTGCAGAGATGACTAAACTACAAGTGGAAGAAACAAGGGATAACGTTCTCTCTGATTCTGAGCTGCCTATAATTATAAATAAATCTGAGCATACTACTTCTTTGGATCATGTAAACAATGCACTCACAATAGTGAAAGATAATGCTAAAGAAAAAATTGAACTTGGTACCATCAGTGCCAATGTCCTAATTGGCGAATCTGCCAGGCAAGAACTGTACATGTTTTATCAGGTAAACATGTCTTCAACGGGATCCATGTCACCACTGAGTAATTTAAAATCGTCATCTTCTCATGCTTCTTTCATGAAGAAAAATGAATTGCAATCCACGATGGGGAATATTGTTTTTAAAGGACCAGAATCATTAGAAGAGGTTTCTCTACAAATTGCAGAGAATGTTGAAGGAGTGGAACCTAGAGCGAGGTATAAAGAAGGCTATCTCCAGCAAAATAATTCCTTGAGGAAACGTAGCAGATCTCTAAGCAACATGGGAGAGACCAATCTGGATCAGAGAAGTAACAAACTTCTTCCCCGGAATTCCAACTCAATCAGGGAGCATGTTGATCAAAAGAATCATCATTCTCAATATCTTAGAACATATAATTCTTTGCTAAAAGATGGAAGGTTACATGAATGTGTTGAATTGCTTAAAGACATGGAAATGAAGGGAATTTTAGATATGACTAAGGTTTATCATGCCAAGTTTTTTAACATCTGCAAGAGACAAAAGGCTGTTAGAGAAGCTTTTGATTACGTTAAGCTTATTCCAAATCCAAAATTGAGTACATTTAATATGCTCATGTCTGTGTGTTCAAGCTCTCAATATTCAGAAGGGGCTTTCCAAGTTCTGCAGCTTGTTCAGGGGGCTGGATTCAAACCTGATTGCAAACTTTATACCACTTTGATATCAACATGTGCCAAGAGTGGTAAAGTTGATCAGATGTTTGAAGCATTTCACAATATGGTTAATTCTGGAATTGAACCTAATGTTCATACCTATGGGGCACTAATTGATGGTTGTGCTAGAGCTGGGCAAGTTGCTAAAGCATTTGGTGCTTATGGGATAATGAGGTCCAAGAAATTGAAGCCAGATCGTGTTGTATTCAATGCACTTATAGCTGCATGTGCTCAGTCAGGAGCAGTGGATCGTGCTTTTGATGTTTTAGCAGAAATGGCAGCAGAACTGCAACCTATTGAACCAGATCATATAACTATAGGTGCATTAATGAAGGCATGTGCAAATGCTGGTCAGGTTGAACGAGCACGGGAAGTGTACAAGTGGTTAGATCAATATGGTATTAAGGGAACCCCAGAGGTCTACACTATTGCCATCAATTCTTGTAGCCAAACCGGAGATTGGGAATTTGCATCTAGTGTATACAGTGACATGAATGGGAAAGGGGTTTTCCCTGATGAGATGGTTCTGAGTGCACTAATAGATGTTGCTGGACATGCTGGAAAGCTAGATGCTGCCTTTGAAGTCCTACAAGAAGCTCGTAGCCAAGGAATACATATTGGAAAAATGTCATACAGCTCTTTGATGGGAGCCTGTAGCAATGCTGGAAATTGGGAGAAAGCATTGGAGCTATATGAGGATCTTAAGTCCCGTAAATTAGTACGTACTGTTTCAACAGTGAATGCTTTGATCACCGCACTGTGTGATGGGGATCATTTTCACAAGGCTATGGAGGTTTTGTTTGAAATGAAAGGATTGGGCTTATGCCCAAACAGCATCACATACTCAATTCTTATCGTAGCAAGTGAGAAAAAGGACGATCTGGAGGCAGCTCAAATGCTTCTATCTCAAGCCAAAATGGATGGTGTTTCCCCTAATCTTGTCATGTGTAGATGTATAACTGGGATGTGCTTGAGGAGATATGAGAGGGCTTGCAATGTTGGTGAACCATCTTTTGACCCAAGACAACCACATGTTAATAATAAGTGGACATCCCTGGCCTTGATGGTCTATCGTGAGATCATTAGAGATGGTATAGTGCCTACGAGTGAAATTCTGTCACAAATTTTTGGATGCCTGCGTCTCCCTTATGATCCCTCTTTGAAAAATAGTCTTATTGAGAACCTGGGAGTAAGTGCTGAAACTTCAAAAAGCTCAAACCTCTGTTCATTGATTGATGGCTTTGGTGAATATGATCCTCGTGCTTTTTCACTACTTGAGGAAGCTGCTTCTCTTGGAATTGTTCCATTTGCATCTTTTAAAGTGAATCCCATTGTTGTGGATTTAAAGGAATTGCACAATTTTACTGCTGAGGTATACCTGTTAACTGTTTTGAAGGGTCTCAAGCATCGTCTTGCAGCAGGCACAAGGTTACCCAACTTAATCATCTTATTGCCTGTAGAGAAAACAAAAGTTGCAACTTCCAAGGGGGAGAAATTTGTTAATGTTTCAGGAAGGGTTGGCCAGGCAATAGCAGCGCTATTGAGGAGGCTGAGAATACCATACCAGGGCAATGAGTCATTTGGGAAGATCAGAATTATTGGAGTAATTTTGAGAAAATGGCTTCAGCCAAAACTTGCATCCCCTTTCAGTGGAAAACCAGGTGACTTTAGCTTGTTGCAGTCACGACTGGGCAAAGGTATCCGTCTTCAACAACGAAACATTCGAGCCAGCAATCTGTCCTTGGATTAA 3327 0.4076 MEVSLTSNHYTLSSTSRSPSAFSLSNLRSFRSQFLGCSHNLRPPGCLSFRNNKCKKLRLLQLHSPRFIFKASLSSHSVVVVVTLVTLSAVSLFYYNYIKRKKNPREILGQPKFALSQQGSNIGNQGIESQILCFQEFQGESLLKEIGILEDKSDKENDDFEGKEAQLTYWTSPMVQEGAVATKKLESPSDVLTSSINSASSSNRSKAVEESCVSMEFQSSSFEPLSFAAEMTKLQVEETRDNVLSDSELPIIINKSEHTTSLDHVNNALTIVKDNAKEKIELGTISANVLIGESARQELYMFYQVNMSSTGSMSPLSNLKSSSSHASFMKKNELQSTMGNIVFKGPESLEEVSLQIAENVEGVEPRARYKEGYLQQNNSLRKRSRSLSNMGETNLDQRSNKLLPRNSNSIREHVDQKNHHSQYLRTYNSLLKDGRLHECVELLKDMEMKGILDMTKVYHAKFFNICKRQKAVREAFDYVKLIPNPKLSTFNMLMSVCSSSQYSEGAFQVLQLVQGAGFKPDCKLYTTLISTCAKSGKVDQMFEAFHNMVNSGIEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKKLKPDRVVFNALIAACAQSGAVDRAFDVLAEMAAELQPIEPDHITIGALMKACANAGQVERAREVYKWLDQYGIKGTPEVYTIAINSCSQTGDWEFASSVYSDMNGKGVFPDEMVLSALIDVAGHAGKLDAAFEVLQEARSQGIHIGKMSYSSLMGACSNAGNWEKALELYEDLKSRKLVRTVSTVNALITALCDGDHFHKAMEVLFEMKGLGLCPNSITYSILIVASEKKDDLEAAQMLLSQAKMDGVSPNLVMCRCITGMCLRRYERACNVGEPSFDPRQPHVNNKWTSLALMVYREIIRDGIVPTSEILSQIFGCLRLPYDPSLKNSLIENLGVSAETSKSSNLCSLIDGFGEYDPRAFSLLEEAASLGIVPFASFKVNPIVVDLKELHNFTAEVYLLTVLKGLKHRLAAGTRLPNLIILLPVEKTKVATSKGEKFVNVSGRVGQAIAALLRRLRIPYQGNESFGKIRIIGVILRKWLQPKLASPFSGKPGDFSLLQSRLGKGIRLQQRNIRASNLSLD 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0151 1108 MobiDBLite consensus disorder prediction 1 20 - -
Prci14g0151 1108 FunFam Pentatricopeptide repeat-containing protein MRL1, chloroplastic isoform X1 621 712 - -
Prci14g0151 1108 Pfam Pentacotripeptide-repeat region of PRORP 636 777 IPR033443 -
Prci14g0151 1108 Pfam Pentacotripeptide-repeat region of PRORP 488 627 IPR033443 -
Prci14g0151 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 521 555 IPR002885 -
Prci14g0151 1108 FunFam Pentatricopeptide repeat-containing protein MRL1, chloroplastic 435 566 - -
Prci14g0151 1108 Pfam PPR repeat 428 451 IPR002885 -
Prci14g0151 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 628 662 IPR002885 -
Prci14g0151 1108 FunFam Pentatricopeptide repeat-containing protein MRL1 chloroplastic 713 860 - -
Prci14g0151 1108 Pfam Pentatricopeptide repeat domain 791 849 IPR002885 -
Prci14g0151 1108 NCBIfam pentatricopeptide repeat 489 522 IPR002885 -
Prci14g0151 1108 NCBIfam pentatricopeptide repeat 771 803 IPR002885 -
Prci14g0151 1108 NCBIfam pentatricopeptide repeat 736 768 IPR002885 -
Prci14g0151 1108 NCBIfam pentatricopeptide repeat 666 699 IPR002885 -
Prci14g0151 1108 NCBIfam pentatricopeptide repeat 558 591 IPR002885 -
Prci14g0151 1108 NCBIfam pentatricopeptide repeat 524 557 IPR002885 -
Prci14g0151 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 591 621 IPR002885 -
Prci14g0151 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 663 697 IPR002885 -
Prci14g0151 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 556 590 IPR002885 -
Prci14g0151 1108 Gene3D Tetratricopeptide repeat domain 463 623 IPR011990 GO:0005515
Prci14g0151 1108 Gene3D Tetratricopeptide repeat domain 624 733 IPR011990 GO:0005515
Prci14g0151 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 803 837 IPR002885 -
Prci14g0151 1108 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 16 1107 - -
Prci14g0151 1108 Gene3D Tetratricopeptide repeat domain 734 862 IPR011990 GO:0005515
Prci14g0151 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 733 767 IPR002885 -
Prci14g0151 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 698 732 IPR002885 -
Prci14g0151 1108 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 768 802 IPR002885 -
Prci14g0151 1108 MobiDBLite consensus disorder prediction 374 405 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0151 595 849 Glycosyltransferase AT1G05670 25.391 2.39e-19 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0151 - - gmx:100814164 1321.22