Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci14g0110 ATGGCGATTCCTAGAAATCGCCTGCTCTTAACTGCACTCCTTTCCATCGTCGTCTCATTCGCCGTTGCTCACGATCAAGTGCAGAAGGAAGTCATATATGATGGAAGGTCTCTGATCATCAATGGAAGACACGAGCTTCTTTTCTCTGGTTCTGTCCATTACACTCGAAGTCCTCCCGAGATGTGGCCAGACATTCTTGATAAGGCAAGACACGGAGGTTTAAACGTGATTCAGACTTACGTGTTTTGGAACGTTCATGAGCCAAAGAAAGGCAAGTGGAACTTTGAAGGAAACTATGATTTGGTGAAGTTTCTGAAGCTCGTTCAACAGAAAGGAATGTACGCAACTCTTAGGCTCGGACCGTTCATCCAGGCAGAATGGAATCATGGAGGACTTCCATATTGGCTAAGAGAGGTACCGGACATCATATTCCGCACGGAAAATGACCCCTTCAAGTTCCACATGGAAAAATACGTGTCAACGGTGATAGATAAAATGAATGCTGAGAAGATGTTTGCCTCCCAAGGAGGTCCCATCATCTTGGCACAGATTGAAAATGAATACAATCACGTCCAAGCAACTTTTAAAGCCCAGGGAGATAATTATGTTCAGTGGGCTGCAAATATGGCGGTGTCGAAGAATGTCGGAGTTCCATGGATCATGTGTAAGCAAACCGATGCTCCTGATCCGGTGATCAATGCATGCAATGGAAGGCAATGTGGGGATACTTTTTCTGGCCCCAACAAACCATACAAGCCCTCCCTATGGACCGAAAACTGGACTGGCCAATATAGAGTTTTCGGAGACCCACCATCACAGAGAAATGCAGAAGATCTTGCCTTTTCAGTTGCTCGCTTTTTCGCTAAGAACGGATCATTGGTCAACTACTATATGTACTATGGTGGAACAAACTTCGGTAGAACCAGCTCTGCTTTCGCTACAACCCGCTATTACGATGAAGCTCCGCTTGATGAATACGGTCTGCAAAGAGAACCAAAATGGGGTCACCTCAGGGACCTTCACAGGGCCCTGAACCTTTGCAAGAAGGCTCTGCTTGGGGCTACGCCTAGTGTCACCATGCTGAGCCAATCCATTGAGACTAGGGTCTTTGAGAAGCCAGAAAGTGGCCTTTGTGCTGCTTTCTTAACTAACAACCACACGCAGAAAGGAGCAACCGTAAACTTCAGAGGCCAGAGCTACTTGTTGCCGCCGCACTCCATTAGCATCCTCCCTGATTGCAAGACTGTGGTCTATAACACTCAAATGGTTGTCTCACAACATAATTCAAGGAACTTCGAGAGATCACAGATTCCAAACAGCAATAAGTGGGAGGTGTTTACAGAAGCCATTCCAACTACCCAGGACGTACCAGCCAATCAGAGTTTTCCTCTAGAACTCTACAGTTTACTTAAGGACGCCACTGACTATGCATGGTACACCACTAGCATCGTGTTAAGTCCAGCAGACATCCCAAAGAAGAATGGAGTATCCCCTGTTCTTCGTATCATTAGTCTTGGCCATTCATTGGTTGCATATGTCAATGGAGAATACCTAGGAACCGCTCATGGCAGCCATGAGGAAAAATCTTTCGTATTTGAGCAAAGTGCAAAATTTCAAGTTGGGGTCAACCACATAGCTATCTTGGCTAGTACTGTTGGACTCCCAGACAGTGGTGCATACATGGAGCACAGGTATGCTGGACCCAAGTCTATAACCATCCTTGGTCTAAACACCGGAACCGTTGATCTGACCATCAACGGATGGGGTCATCAGGTTGGTCTCACAGGTGAGAAACTTGGGCTCTTCACCGAGGACGGATCAAAACAGGAACAATGGAAACCCGTCAATGGACGTCAACCAGCCCTCTCTTGGTACAAGAGACATTTTGATGCCCCAGAAGGAAGAGATCCTGTTGCCATTCGAATGAATGGCATGGAGAAGGGCATGATTTGGATAAACGGTAAAAGCATTGGTCGCTATTGGATGAGCTACCTCTCTCCTCTAGGACAGCCTAGTCAATCAGAGTACCACAACCCAAGAGCTTGGCTGAAAGACAAAGACAATTTGGTGGTCGTGTTGGAGGAGGCGCCTGCAACACCAGAGGAGATCGAGGTCCTGACCGTGGACAGAGACACAATCTGCAGTCACATCACAGATAATCACCCTCCCAGTGTCAAATCCTGGGGGAACAAGAACAGTCAATTCCCATCCATAGCGGAGAAGGCGATCCCGGGAGCTGCACTGAAATGCCCGAACCAGAAGAGGATTGTAAGTGTAGATTTCGCGAGCTTTGGAAACCCTAGGGGTTTCTGCGGCGGCTACACTGTGGGTAATTGCAGTCTGCGGGCAACGAAGCAGATTGTGGAGCAGCAATGCCTGGGGAAAACGAGCTGTTCGGTTCCAATGGATCCCAAGGTATTGTTAAAGAATGGCGATGCTTGCCCTGGTGTGAGGAAGACTCTTGCTATCCAAGTGAAGTGTTCCCTTTAG 2490 0.4759 MAIPRNRLLLTALLSIVVSFAVAHDQVQKEVIYDGRSLIINGRHELLFSGSVHYTRSPPEMWPDILDKARHGGLNVIQTYVFWNVHEPKKGKWNFEGNYDLVKFLKLVQQKGMYATLRLGPFIQAEWNHGGLPYWLREVPDIIFRTENDPFKFHMEKYVSTVIDKMNAEKMFASQGGPIILAQIENEYNHVQATFKAQGDNYVQWAANMAVSKNVGVPWIMCKQTDAPDPVINACNGRQCGDTFSGPNKPYKPSLWTENWTGQYRVFGDPPSQRNAEDLAFSVARFFAKNGSLVNYYMYYGGTNFGRTSSAFATTRYYDEAPLDEYGLQREPKWGHLRDLHRALNLCKKALLGATPSVTMLSQSIETRVFEKPESGLCAAFLTNNHTQKGATVNFRGQSYLLPPHSISILPDCKTVVYNTQMVVSQHNSRNFERSQIPNSNKWEVFTEAIPTTQDVPANQSFPLELYSLLKDATDYAWYTTSIVLSPADIPKKNGVSPVLRIISLGHSLVAYVNGEYLGTAHGSHEEKSFVFEQSAKFQVGVNHIAILASTVGLPDSGAYMEHRYAGPKSITILGLNTGTVDLTINGWGHQVGLTGEKLGLFTEDGSKQEQWKPVNGRQPALSWYKRHFDAPEGRDPVAIRMNGMEKGMIWINGKSIGRYWMSYLSPLGQPSQSEYHNPRAWLKDKDNLVVVLEEAPATPEEIEVLTVDRDTICSHITDNHPPSVKSWGNKNSQFPSIAEKAIPGAALKCPNQKRIVSVDFASFGNPRGFCGGYTVGNCSLRATKQIVEQQCLGKTSCSVPMDPKVLLKNGDACPGVRKTLAIQVKCSL 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci14g0110 829 SUPERFAMILY (Trans)glycosidases 30 347 IPR017853 -
Prci14g0110 829 Pfam Glycosyl hydrolases family 35 37 343 IPR031330 -
Prci14g0110 829 SUPERFAMILY Galactose-binding domain-like 407 568 IPR008979 -
Prci14g0110 829 CDD Gal_Rha_Lectin_BGal 746 827 - -
Prci14g0110 829 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 176 188 IPR019801 GO:0004553|GO:0005975
Prci14g0110 829 PRINTS Glycosyl hydrolase family 35 signature 117 136 IPR001944 GO:0004553|GO:0005975
Prci14g0110 829 PRINTS Glycosyl hydrolase family 35 signature 292 307 IPR001944 GO:0004553|GO:0005975
Prci14g0110 829 PRINTS Glycosyl hydrolase family 35 signature 174 189 IPR001944 GO:0004553|GO:0005975
Prci14g0110 829 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Prci14g0110 829 PRINTS Glycosyl hydrolase family 35 signature 62 80 IPR001944 GO:0004553|GO:0005975
Prci14g0110 829 PRINTS Glycosyl hydrolase family 35 signature 311 327 IPR001944 GO:0004553|GO:0005975
Prci14g0110 829 PRINTS Glycosyl hydrolase family 35 signature 255 270 IPR001944 GO:0004553|GO:0005975
Prci14g0110 829 PRINTS Glycosyl hydrolase family 35 signature 41 58 IPR001944 GO:0004553|GO:0005975
Prci14g0110 829 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Prci14g0110 829 FunFam Beta-galactosidase 590 714 - -
Prci14g0110 829 Pfam Galactose binding lectin domain 748 827 IPR000922 GO:0030246
Prci14g0110 829 ProSiteProfiles SUEL-type lectin domain profile. 744 828 IPR000922 GO:0030246
Prci14g0110 829 Pfam Beta-sandwich domain in beta galactosidase 351 423 IPR041392 -
Prci14g0110 829 Gene3D - 593 718 - -
Prci14g0110 829 SUPERFAMILY Galactose-binding domain-like 585 734 IPR008979 -
Prci14g0110 829 Gene3D - 385 567 - -
Prci14g0110 829 PANTHER BETA-GALACTOSIDASE RELATED 21 741 IPR001944 GO:0004553|GO:0005975
Prci14g0110 829 Gene3D - 743 829 IPR043159 -
Prci14g0110 829 Gene3D Glycosidases 26 347 - -
Prci14g0110 829 FunFam Beta-galactosidase 27 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci14g0110 Prci-Chr14 873877 879927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci14g0110 30 827 Glycoside Hydrolase AT2G16730 59.102 0.0 1044
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci14g0110 - - gmx:102663614 1242.25