Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2472 ATGGTAAAGGATCGGAAAATCGGTGTCGCCCTCGACTTCTCCAGAAGCAGCAAGAACGCTCTTAAATGGGCTCTGGACAATTTGGCCGATAAGGGCGACACCTTTTACATCATCCACATCAATCCCAATTCCCTCGATGAGTCCCGTAACCAGCTTTGGGCTCAATCCGGTTCTCCTCTTATTCCTTTGACTGAGTTCAGAGAGCCAGAGATTATGAAGAAGTATGGTGTTCAGACTGATATTGAGGTTCTTGATTTGCTTGACACTGGTGCTAGACAGAAAGAGGTGAACATTGTGACAAAAATATACTGGGGTGATGCGAGGGAGAAACTTCTGGATGCCATTGAAGATCTGAAGTTGGATTCGCTGGTCATGGGAAGCAGGGGCCTTAGCACTCTCAGAAGGATTATATTGGGAAGTGTCAGCAACTTTGTGATGACTCATGCTCCTTGCCCGGTGACCATCGTGAAGGATTCAAGCAGTAGCAACTAG 492 0.4695 MVKDRKIGVALDFSRSSKNALKWALDNLADKGDTFYIIHINPNSLDESRNQLWAQSGSPLIPLTEFREPEIMKKYGVQTDIEVLDLLDTGARQKEVNIVTKIYWGDAREKLLDAIEDLKLDSLVMGSRGLSTLRRIILGSVSNFVMTHAPCPVTIVKDSSSSN 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2472 163 PANTHER IMP2'P 1 161 - -
Prci13g2472 163 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Prci13g2472 163 CDD USP_Like 6 156 - -
Prci13g2472 163 Pfam Universal stress protein family 5 157 IPR006016 -
Prci13g2472 163 Gene3D HUPs 1 163 IPR014729 -
Prci13g2472 163 PRINTS Universal stress protein signature 117 129 IPR006015 -
Prci13g2472 163 PRINTS Universal stress protein signature 4 22 IPR006015 -
Prci13g2472 163 PRINTS Universal stress protein signature 135 157 IPR006015 -
Prci13g2472 163 FunFam Universal stress protein family protein 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2472 Prci-Chr13 39099123 39101613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2472 3 156 Receptor kinase-like Gene Family AT5G35380 27.044 2.80e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2472 - - jre:109012035 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2472 13 39099123 39101613 Prci12g0291 12 2429131 2430326 CCT
Prci13g2472 13 39099123 39101613 Prci13g2472 13 39099123 39101613 ECH