Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2422 ATGACCGAGACAATGTTGGCCCAGAAGCAGGCAGAGGAGGCCATCGTTTCCGGCGAAACAGAGCATGAAGGAGGGAAGATGGAAGACGGAGAAGATCAGCCGGAGCAACAGAGCGCTGGCTTCAGCTTCAAGAACTTGCTCTGGCATGGTGGTTCTGTATGGGATGCTTGGTTCAGCTGTGCTTCGAATCAAGTAGCTCAAGTGCTCTTGACGCTTCCATATTCTTTCTCTCAGCTGGGTATGCTCTCTGGCATCTTGCTTCAGATATTCTATGGGATAATCGGAAGCTGGACGGCTTATCTAATCAGTGTACTCTACATGGAGTACCGAACCAGAAAGGAAAAGGAAAACGTCAGCTTCAAGAACCATGTCATTCAGTGGTTCGAAGTCCTGGATGGGTTACTAGGGCCATACTGGAAGGCCGTGGGGCTAGCTTTCAACTGTACTTTCCTCCTTTTTGGATCTGTGATACAGCTAATAGCATGTGCAAGTAACATCTACTACATAAATGACAACTTGGATAAAAGGACCTGGACTTATATTTTTGGGGCTTGCTGTGCCACCACTGTGTTCGTACCTTCATTCCATAACTACCGAATCTGGTCATTTCTTGGCCTCGCTATGACCACTTACACTGCTTGGTATTTGGCCATCGCAGCTCTAATTCACGGCCAGGCAGATAACGTGAGTCACTCGGGTCCGAACAAGCTAGTACTGTACTTCACCGGAGCGACCAATATACTGTACACGTTCGGTGGACACGCCGTCACCGTGGAGATAATGCACGCAATGTGGAAGCCTCAGAAGTTCAAGTTCATTTATTTACTGGCCACGCTTTATGTGTTCACTCTGACGATTCCGTCGGCCGCCGCAGTTTACTGGGCGTTTGGCGACGAGCTGCTAAACCACTCCAACGCCTTCTCTCTCCTCCCCAAGACCCGGTTCCGTGACGCCGCCGTCATCCTCATGCTCATTCACCAATTTATAACGTTTGGGTTTGCATGTACGCCGTTGTACTTTGTGTGGGAGAAGGTGATCGGGATGCATGACACGAAGAGCATATGCTTGAGGGCGGTGGTGAGGTTGCCGGTGGTGATCCCGATATGGTTCTTGGCGATCATCTTTCCGTTCTTTGGTCCCATAAATTCTACCGTCGGGGCTCTCCTCGTTAGCTTCACCGTTTACATCATCCCATCTTTGGCTCATATGCTCACTTATCGGACTTCTTCCGCTAGACAGAATGCTGTAGAGAAGCCTCCAGCCTTCATGGGAAGCTGGACTGCCATGTATGTCCTCAATGCCTTCATTGTGGTATGGATTCTGGTTATTGGATTTGGGTTTGGAGGATGGGCCAGCATGGCCAATTTTATCAAGCAAATCGATGATTTCGGCCTCTTTGCCAAGTGCTACCAGTGCAAGTACCCGGCTTCACCGCCGGGGGCCACGGTAGCTCCACCACCTCATCACCACTGA 1473 0.501 MTETMLAQKQAEEAIVSGETEHEGGKMEDGEDQPEQQSAGFSFKNLLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGIIGSWTAYLISVLYMEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLAMTTYTAWYLAIAALIHGQADNVSHSGPNKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKFIYLLATLYVFTLTIPSAAAVYWAFGDELLNHSNAFSLLPKTRFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRAVVRLPVVIPIWFLAIIFPFFGPINSTVGALLVSFTVYIIPSLAHMLTYRTSSARQNAVEKPPAFMGSWTAMYVLNAFIVVWILVIGFGFGGWASMANFIKQIDDFGLFAKCYQCKYPASPPGATVAPPPHHH 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2422 490 PANTHER OS05G0424000 PROTEIN-RELATED 56 438 - -
Prci13g2422 490 MobiDBLite consensus disorder prediction 1 36 - -
Prci13g2422 490 MobiDBLite consensus disorder prediction 15 33 - -
Prci13g2422 490 Pfam Transmembrane amino acid transporter protein 49 442 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2422 Prci-Chr13 38538847 38542997 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g2422 7 490 Organic Solute Cotransporters AT2G21050 75.207 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2422 K13946 - gmx:100810532 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2422 13 38538847 38542997 Prci12g0232 12 1704070 1709852 CCT