Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2310 ATGGAGACTACTACTGTGAAGCCCGGCTTTCTCAGGAATATTCTCATACGGTCGCTTCTGTTTGGGGTTTTCATTATAGTCGTTCGGTTTGCTTATGTCATCACCATCGCCGGCGAGTCTTGCGACGTCGGCGACTTCTGCTTCTTCTCCCTGCCGGAGTCTCTCAACTTTGTGGTAGCCGGCGCTGGCGCTGGGGCTTTGGCCGTCGAGTCCAATGAGGCCGTAGTTAGCCGATCTGCGGCGCGTCCGGAGGTTTACTCGAGCAAAGAGTGGAACGAGGCCGTTCGTTTCTACTCATCCGTGTTCAAGGATCTCGTATCCTATGGCTATCTCTCGCCAGAGTCGAAATCTCTCTGCGTTGAGACGCCGACCGGTCGCGACGTATTCGCATTGAAGGAGATCGGCGTCTCGGACTCGATTGGGATTGCAAAGAAAGCTTCGAAGCCACTGGTGAAAGCAGGACAGGCTCATCGCATGCCCTTTCGCGACAACACCTTCGACTTCATATTTTCCGGCGAGGGTGGGCTCGAGAAATCGGCGCGACCTTCAGATTTCGCCTCTGAGATTGCTCGGACGCTGAAACCCGAAGGGTTTGTGGTGTTCCATGTAAAGGCTAAAGATACGTATAGTTTCAATTCATTCCTTGATTTGTTTACTAATTTCAAAGTAGTGAAAACGCATGATATAGATGGATTTGATTCCTCAATGCCTCACATACGAGAAATTGTTCTGAGGAAAGAGTTTGATGGCATTGTTCATGAGTTTGAGAAATTCGATGATGATTCTAATGGAAAATGCTCCACTCATGGGTACAAACAAGAATTGGTCAGAAATGCAGAGCCTTTGATCGCTGAGGAACCACTAAAACCATGGATTACTTTGAAGAGGAACATAAAGAACATAAAGTACCTTCCATCAATGGTTGATATAAGCTTCAAGAGTAGGTATGTTTATGTGGATGTTGGAGCTAGAAGTTATGGCTCTAGTATAGGAAGTTGGTTCAGGAAGCAGTATCCAAAACAGAACAAGACCTTTCATGTGTATGCAATTGAGGCTGATAAAACTTTTCATCAAGAGTATAGCTTGAAGAAGGGAATCACTCTGCTACCTTATGCTGCTTGGGTAAAGAACGAAACTTTAACCTTTGAGATTCATCGGGACCCTGGCGAGCAAGTCGATGTTAAGGGCAGAGGCATGGGTAGAATTCAGCCGTTGCAATCATCATCATTTGGTGATTTTGATGGCGAAGTTGAGAAAATCCAGGGGTTTGATTTTGCAAACTGGTTGAAGAACAGTGTCTCAAAGAATGATTTTGTAGTGATGAAGATGGACGTGGAAGGTACTGAATTCGATCTGATTCCAAAATTGTTCGAAACAGGAGCTATTTGTTTGGTGGACGAGATTTTCCTCGAGTGCCACTACAATAGATGGCAAAGATGTTGCCCTGGGCAGAGGAGTGCAAAATATGAGAAGACTTATGATCAATGCTTGGAGCTCTTCAATTCTCTGAGGCAAAGTGGAGTTCTTGTTCATCAATGGTGGTAA 1545 0.4557 METTTVKPGFLRNILIRSLLFGVFIIVVRFAYVITIAGESCDVGDFCFFSLPESLNFVVAGAGAGALAVESNEAVVSRSAARPEVYSSKEWNEAVRFYSSVFKDLVSYGYLSPESKSLCVETPTGRDVFALKEIGVSDSIGIAKKASKPLVKAGQAHRMPFRDNTFDFIFSGEGGLEKSARPSDFASEIARTLKPEGFVVFHVKAKDTYSFNSFLDLFTNFKVVKTHDIDGFDSSMPHIREIVLRKEFDGIVHEFEKFDDDSNGKCSTHGYKQELVRNAEPLIAEEPLKPWITLKRNIKNIKYLPSMVDISFKSRYVYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFHQEYSLKKGITLLPYAAWVKNETLTFEIHRDPGEQVDVKGRGMGRIQPLQSSSFGDFDGEVEKIQGFDFANWLKNSVSKNDFVVMKMDVEGTEFDLIPKLFETGAICLVDEIFLECHYNRWQRCCPGQRSAKYEKTYDQCLELFNSLRQSGVLVHQWW 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2310 514 Pfam Methyltransferase domain 147 201 IPR013216 GO:0008168
Prci13g2310 514 Gene3D Vaccinia Virus protein VP39 125 278 IPR029063 -
Prci13g2310 514 Gene3D Vaccinia Virus protein VP39 299 480 IPR029063 -
Prci13g2310 514 PANTHER METHYLTRANSFERASE 1 514 - -
Prci13g2310 514 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 302 459 IPR029063 -
Prci13g2310 514 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 151 232 IPR029063 -
Prci13g2310 514 Pfam Methyltransferase FkbM domain 320 480 IPR006342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2310 Prci-Chr13 37546729 37549427 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2310 - - qsa:O6P43_026298 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2310 13 37546729 37549427 Prci12g0081 12 713006 715228 CCT
Prci13g2310 13 37546729 37549427 Prci13g2310 13 37546729 37549427 ECH